| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1014 |
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| Symbol | |
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| ID | 4012387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1031131 |
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| End bp | 1032387 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637940693 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_547866 |
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| Protein GI | 91786914 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0682578 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCC CCTATGAGCT GATTTTGGGC TGGCGCTACA CCCGCGCTGG CCGGGCCACA
CGGCGCAACG GCTTTATCTC CTTTATTTCG GGCGTGTCCA TGCTGGGCAT TGCGCTGGGC
GTGGCCGCGC TGATCATTGT GCTGAGCGTG ATGAACGGCT TCCAGAAGGA AGTCCGCGAC
CGCATGCTGG GCGTGATCTC CCACATCGAG GTGTTCGCGC CCAATGGCGC CGCGCTGCCC
GACCCGCAGA AAACCCTGGC CGAGATCAAG GCCAACCCGC AAGTGGTGGG CGCCGCCACC
TTCATCGCCG CGCAGGCCCT GCTGGCGCGC GGCGAAGACA TGAAGGGCAC GCTGGTGCGC
GGCATCGATC CGGCGCTGGA AGGGCAGGTC ACCGACCTCG CGGTGCAACT GAAAGACACG
GCCTTTCCCA AACTGGTGAG CGGCGGCTTT GGCGTGGTGC TGGGCGGCGA ACTGGCACGC
TCCATGGGTG TGCGTGAGGG CGACACCGTC ACGCTGATCG CGCCCAGCGG CCAGGTCACG
CCCGCCGGCG TGGTGCCGCG CCTCAAGCAA ATGACGGTGG TGGGCACCTT CGACTCCGGC
CACTTTGAAT ACGACTCGGC GCTCGTCATG CTGCACCAGG ACGACGCCGC CCGGATTTTC
CGGCTGGAGG GCCCGACCGG CATCCGCATC AAGCTGAAAG ACCTGCACCA GGCGCGCGAA
GTCGCGCTGG AGCTGTCCAG AAGCCTGACC GGCGACCTGC TGATTCGCGA CTGGACGCGG
CAGAACAAAA CCTGGTTTGC GGCGGTGCAG CTTGAAAAAC GCATGATGTT CATCATCCTG
ACGCTGATCG TGGCGGTGGC GGCCTTCAAC CTCGTCAGCA CGCTGGTGAT GACGGTGACC
GACAAGCGCG CCGACATCGC CATCCTGCGC ACCCTGGGCG CCAGCCCCCA GAGCATCATG
AAGATATTCA TGGTGCAAGG CGCCCTGGTC GGCGTGATCG GCACCTTCTC GGGCCTGCTG
CTCGGCCTGG GCATTGCCTT GAATATTGAC GTCATCGTGC CGGCGCTGGA GCGGCTGCTC
AATGCGAGCT TCCTGCCCAA AGACATCTAC CTGATCAGCC GCATGCCCAG CGAGCCGCAG
TACGCCGACA TCATGCCGAT TGTCGTCATC TCACTGGTAC TGGCATTTCT GGCCACCATC
TACCCCAGCT GGCGCGCCAG CCAGGTGAAC CCGGCCGAGG CCCTGCGTTA TGAATAA
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| Protein sequence | MQIPYELILG WRYTRAGRAT RRNGFISFIS GVSMLGIALG VAALIIVLSV MNGFQKEVRD
RMLGVISHIE VFAPNGAALP DPQKTLAEIK ANPQVVGAAT FIAAQALLAR GEDMKGTLVR
GIDPALEGQV TDLAVQLKDT AFPKLVSGGF GVVLGGELAR SMGVREGDTV TLIAPSGQVT
PAGVVPRLKQ MTVVGTFDSG HFEYDSALVM LHQDDAARIF RLEGPTGIRI KLKDLHQARE
VALELSRSLT GDLLIRDWTR QNKTWFAAVQ LEKRMMFIIL TLIVAVAAFN LVSTLVMTVT
DKRADIAILR TLGASPQSIM KIFMVQGALV GVIGTFSGLL LGLGIALNID VIVPALERLL
NASFLPKDIY LISRMPSEPQ YADIMPIVVI SLVLAFLATI YPSWRASQVN PAEALRYE
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