Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1005 |
Symbol | |
ID | 4012378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 1020424 |
End bp | 1021284 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637940684 |
Product | PHP-like |
Protein accession | YP_547857 |
Protein GI | 91786905 |
COG category | [R] General function prediction only |
COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00117289 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACCCTCA AAAACATCCT CAATGCCGAC CTGCATTGCC ACTCCGTCGT ATCAGACGGC ACCTTGACCC CGGAGGCCCT GGCAGAGCGC GCCAAAACCA ATGGCGTGGA GTTGTGGGCA CTGACTGACC ATGACGAGAT CGGCGGCCAG CAGCGGGCCG CCGCCGCCGC CAGGGCGCAG GGGCTGTATT ACCTCACCGG CACCGAGATC TCGGTCACCT TCGCCGGCGA AACCGTGCAC ATTGTGGGCC TGGGTTTTGA TGCCGACGAT GCAGACTTGC AGCAGGGTTT GCGCAACACG CGGGGCGGCC GGGAACAGCG CGCCATGGAA ATGTCTGAGG GCCTGGCCAA GGTAGGCATC AAAGGGGCCT ACGAAGGGGC ACTGAAGTTC GTCGGCAACC CCGAGCTGAT TTCGCGCACG CACTTTGCCC GCTTTCTGGT GGAGTCCGGC ATATGCCGCG AAACAGCCGA TGTCTTTCGC AAGTACCTCA CCGAAGGCAA ACCTGGTTAT GTACCGCACC GCTGGGCCAA TCTGCGCGAT GCGGTGGGCT GGATCACGAA GGCTCAGGGC GTGGCGGTGA TCGCCCACCC GGGCCGCTAC AAGTTCACGC CCAATGAAGA GTACGCGCTC TTCACCGAGT TCAAGGCGCA TGGCGGCCAG GCGGTTGAAG TCGTCACGGG CAGCCACACC CCACAGGAAT ACGTGAAATA TGCCGGGACG GCCAAGGAAT TCGGCCTGGC CGCTTCGCGC GGCAGCGACT TTCACAGCCC CGACGAGAGC CACACCGACC TCGGCACCCT GCCGTTTTTA CCAGGCGAGC TCACCCCCGT GTGGGACCTG CTGGCGGACC GGATCCAGTA A
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Protein sequence | MTLKNILNAD LHCHSVVSDG TLTPEALAER AKTNGVELWA LTDHDEIGGQ QRAAAAARAQ GLYYLTGTEI SVTFAGETVH IVGLGFDADD ADLQQGLRNT RGGREQRAME MSEGLAKVGI KGAYEGALKF VGNPELISRT HFARFLVESG ICRETADVFR KYLTEGKPGY VPHRWANLRD AVGWITKAQG VAVIAHPGRY KFTPNEEYAL FTEFKAHGGQ AVEVVTGSHT PQEYVKYAGT AKEFGLAASR GSDFHSPDES HTDLGTLPFL PGELTPVWDL LADRIQ
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