Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1004 |
Symbol | |
ID | 4012377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 1019519 |
End bp | 1020424 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637940683 |
Product | putative transmembrane protein |
Protein accession | YP_547856 |
Protein GI | 91786904 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.583779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00109211 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCGGCC TCGCAAGAAC CGCTCCCCAC GCTCTGACCG GCATCGCACT CCAGGTGGCG GCCATGGCCT GCTTTGCCCT GCTGGACACC ACCACAAAAT TCATCAGCGC CAGTGTGCCG GTGCTGATGG CCCTGTGGTT TCGCTACGCG TTCCAGGCGG TTGCAACCAC GGTGGCGGTG CTTCCGGTGC GCGGCCGCTC GCTGCTGCGC ACGGCCCACC CGCGCTTTCA ATGCCTGCGC GGTGTGCTGC TGCTGACCTC CAGCATGCTG GCGTTCTTCA GCCTCAAGTA CATGCCGGTG GGCGAATTCA CGGCCATCGT GATGATCTCG CCGCTCGTGA TCACCCTGCT CGCGTCGCTG ACGCTGGGCG AACGGGTCTC CGCGTTACGC TGGACGCTGG TGATCGGCGG TTTTTTGGGC ACCCTGATCA TCATCCGGCC TGGCGACGAC ACCTTTGACT GGACCATGCT GCTGCCCTTG GCGCTGGTGG CCACCCATGC CTGGTTCCAG ATCCTGACCA GCCGGCTGGC CCGCACCGAG GACCCCGTCA CCATGCATTT TTATACCGGC TGGGTGGGCA CACTGATCGC TTCGCTGGCC CTGCCATTTG CCTGGACCTG GCTGGACTCC TGGACGCTGT GGGGCGGCCT GGTGCTCATG GGAGTGATGG GCACAGTCGG ACATTTCATG ATGATCCTGG CCTATGGCCG CGCACCCGCG TCGACACTGA CACCCTTTCT TTACACGCAG ATCGGTTTTG CGATGATAGG CGGCTGGCTG GCGTTTTCAC ATGTACCCGA TCGCTGGTCG ATACTCGGCA TAGCCCTGAT TGCGACGTGC GGCGCGGCCG GCGCGTGGCT TTCGGTGCGC GAGACCCGGG TCCCTGTTGC CCCCCCTGAA TCCTGA
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Protein sequence | MAGLARTAPH ALTGIALQVA AMACFALLDT TTKFISASVP VLMALWFRYA FQAVATTVAV LPVRGRSLLR TAHPRFQCLR GVLLLTSSML AFFSLKYMPV GEFTAIVMIS PLVITLLASL TLGERVSALR WTLVIGGFLG TLIIIRPGDD TFDWTMLLPL ALVATHAWFQ ILTSRLARTE DPVTMHFYTG WVGTLIASLA LPFAWTWLDS WTLWGGLVLM GVMGTVGHFM MILAYGRAPA STLTPFLYTQ IGFAMIGGWL AFSHVPDRWS ILGIALIATC GAAGAWLSVR ETRVPVAPPE S
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