| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0987 |
|---|
| Symbol | |
|---|
| ID | 4010931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1004524 |
|---|
| End bp | 1005441 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637940666 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_547839 |
|---|
| Protein GI | 91786887 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000226194 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCA CGCTTGTTTT CGCGCAGCTG CTCAACGGCC TGCAATACGG CGTCCTGCTG
TTTCTGCTGG CTGCAGGCCT GACGCTGGTC TTCGGCATCA TGAGCTTCGT CAACCTGGCG
CACGGCTCGC TCTACATGAT GGGCGCGTAC TTCGCCGCCA CGGCCTTCCA GTACACCGGC
TCCTTCGGGC TGGCCGTGCT GGCGGCCATG CTGGGCTCGC TGCTGCTGGG CCTGGCGCTG
GAGTTCGTCG CCGTGGCGCG CCTGTACCGC CGCGACCACC TCGACCATGT GCTGGCCACC
TTCGGCCTGG TGCTGTTCTT CAATGAACTG GTGCGCATCA TCTGGGGAGC GCAGCCGGTA
TTTCTGCAGG TTCCGGAATT CCTCGGCGGC GCCATCGACA TCGGCGGCTT CAGCTACCCG
GCCTACCGGT TCGCCATCAT CGTCGTCGGT CTGGTCGTGG CGATCGGTTC CTGGCTGCTG
ATCAACAAGA CCCGCGTGGG CATGCTGATC CGCGCCGGCG CCGTCAACCC CGCGATGGTG
GCGGCCCTGG GCGTCAACAT TCGCCTGCTC AACGCCATGC TGTTTGCGGT CGGCGCCATG
CTCGCGGGTC TGGCGGGCGC GATGGCCGGA CCCATCCTGT CGGTGCAGTC CGGCATGGGC
GAGTCGGTGC TGATCACCAC GCTGGTCGTC ATCGTGATCG GCGGCATCGG CTCGGTCACC
GGCGCGTTTT ACGCGGCGCT CATCGTCGGC ATCGTCGACA CCATGGGCCG CGTATTTCTG
CCCTTCCTGC TGCGCCAGGT CACCGAGCGG TCGTTCGCCG ACGCGGCCGG CCCGGCGCTG
GCCTCCATGC TGGTGTACCT GCTGATGGCG GTGGTGCTGG CGTGGCGCCC GCAAGGTCTT
TTTCCGGCGA ACAGGTGA
|
|---|
| Protein sequence | MNSTLVFAQL LNGLQYGVLL FLLAAGLTLV FGIMSFVNLA HGSLYMMGAY FAATAFQYTG
SFGLAVLAAM LGSLLLGLAL EFVAVARLYR RDHLDHVLAT FGLVLFFNEL VRIIWGAQPV
FLQVPEFLGG AIDIGGFSYP AYRFAIIVVG LVVAIGSWLL INKTRVGMLI RAGAVNPAMV
AALGVNIRLL NAMLFAVGAM LAGLAGAMAG PILSVQSGMG ESVLITTLVV IVIGGIGSVT
GAFYAALIVG IVDTMGRVFL PFLLRQVTER SFADAAGPAL ASMLVYLLMA VVLAWRPQGL
FPANR
|
|---|
| |