| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0982 |
|---|
| Symbol | |
|---|
| ID | 4010926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1000376 |
|---|
| End bp | 1001071 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637940661 |
|---|
| Product | fumarylacetoacetate (FAA) hydrolase |
|---|
| Protein accession | YP_547834 |
|---|
| Protein GI | 91786882 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.452989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000222561 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACTACG CCATCGAACC CGCCGTCATC CCCACGCTTG CCGTAGCAGG CATCAGCGAA
CGCTTTCCCG TCAACCGGAT CTTTTGTGTG GGCCGAAACT ACGCCGCGCA TGCGCGCGAG
ATGGGCAAAG ACCCTGACCG CGACCCGCCG TTCTTTTTCA TGAAACCGGC CAACGCCGCT
GTCGATGCGT CGTCGCCTGT CAGCATTCCC TATCCGCCGA AGACGAAGAA CTTCCACCAC
GAAATTGAAC TCGTCGTCGC CCTCGGCAAG GGCGGCCGCG ACATCGCTGT GGCCGATGCG
CTGGACCACG TCTACGGCTA CGGCGTCGGC CTGGACATGA CACGCCGCGA CCTGCAACTC
GACGCGCGCG ACAAGGGCCG CCCCTGGGAA TTCGGCAAGT CCTTCGCGCT GTCGGCACCC
GTCGGCGCGC TGTCACGCGT GGCCGACAGC GGCCATGTGG CTGAAGGCGC CATCAGCGTC
ACAGTCAATG GCAGCGCCCG TCAGTCGTCG GACATTGCCA AGCTGATCTG GTCGGTCTCG
GAATGCATCG CCTACCTGTC CGAATACGAA ACGCTGGAGC CCGGCGACAT CATCATGACC
GGCACCCCCG AGGGCGTGAA CGCCGTGGTT GCGGGCGACG TGATGCAGGG CGACATCGCG
GGCCTGGCCG GCATCACGGT CACGGTGAAG GCCTGA
|
|---|
| Protein sequence | MNYAIEPAVI PTLAVAGISE RFPVNRIFCV GRNYAAHARE MGKDPDRDPP FFFMKPANAA
VDASSPVSIP YPPKTKNFHH EIELVVALGK GGRDIAVADA LDHVYGYGVG LDMTRRDLQL
DARDKGRPWE FGKSFALSAP VGALSRVADS GHVAEGAISV TVNGSARQSS DIAKLIWSVS
ECIAYLSEYE TLEPGDIIMT GTPEGVNAVV AGDVMQGDIA GLAGITVTVK A
|
|---|
| |