| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0974 |
|---|
| Symbol | |
|---|
| ID | 4011730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 992015 |
|---|
| End bp | 992989 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637940654 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_547827 |
|---|
| Protein GI | 91786875 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.013055 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCC GTGAACTTCT CACCTCCGTG CCGGCGCTTG CTGCCGGCAC CTTGCCATCA
TGGGCCACAG CACAGTATGC CTATCCGAGC GCGCCCGTGA AGGTGCTGGT GGGGTTTCCT
CCAGGTACAG CAACAGACGC GGCGGTGCGC ACCTTGGTAG AGCAGATGTC CAGGCGCCTG
GGCCAGCCCT TCATCGTGGA CAACAAGTCT GGCGGGGGCA GCAACATCGC CGCCAAGGCA
GTGGCCACGG CCAAGCCCGA TGGCTACACC CTCTTCGCGA TCACGGTCGC CAACATCATC
AACGGCGCGT TTCCGGGCGC CAATGCGGTC GACCCATTGA AGGAGTTCAA GCCGATCACG
CTGATCGGGA ACGTTCCCAA TGTCCTGGTG GTTCATCCCT CGCTGAAGGT CACGACCGTT
GCCGAGCTCA TTGCGCTCGC AAAGGCCAAG CCCGGCTCCC TGACCTATGC CTCATCCGGC
GTCGGCACCT CCCCCCATCT ATCGGGTGAA CAGTTCGCGC TCATGGCCAA CGTCAAGATG
GTCCACGTCC CATACAGGGG GAGCACGCCT GCGGTGACAG ACCTGCTTGG CGGCCAGGTG
CAGCTCATGT TCTCACCGGC TTCGACCGTG CTGCCGCACG TCCGGGCGAA CAAGTTGGTA
GCGCTGGCCG TCACCACCCT TAGCAGGACG TCAAGCGCGC CGGAACTCTA CACGCTCGAC
GAACTGGGAC TGAAGGGTTT TAACACTTCT GTGTGGATGG GGCTGGTGGC CCCGGCCCAG
ACACCATCCA GTGTCATCAG CAAGCTGCGC GCCACGGCCC ACGCGGCGCT CGATTCAAGC
GAGGTCCAGG CGATCTACAA GGCGCAGGCA ATCGACACGC TCAAAACCAG CGATGAAGAG
CTGTCCCGCT TCCTGCAGAA CGAGATGGCG CGGTGGTCGA AGTTCATTAA ACAGGCAGAC
ATCAAGCCCG AGTAA
|
|---|
| Protein sequence | MKRRELLTSV PALAAGTLPS WATAQYAYPS APVKVLVGFP PGTATDAAVR TLVEQMSRRL
GQPFIVDNKS GGGSNIAAKA VATAKPDGYT LFAITVANII NGAFPGANAV DPLKEFKPIT
LIGNVPNVLV VHPSLKVTTV AELIALAKAK PGSLTYASSG VGTSPHLSGE QFALMANVKM
VHVPYRGSTP AVTDLLGGQV QLMFSPASTV LPHVRANKLV ALAVTTLSRT SSAPELYTLD
ELGLKGFNTS VWMGLVAPAQ TPSSVISKLR ATAHAALDSS EVQAIYKAQA IDTLKTSDEE
LSRFLQNEMA RWSKFIKQAD IKPE
|
|---|
| |