| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0949 |
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| Symbol | |
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| ID | 4011083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 970565 |
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| End bp | 972274 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637940629 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_547803 |
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| Protein GI | 91786851 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.22082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.366472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACACA TCGGCAACGA TGCTGCGTCT CCGGGCGAAT CAAGTGAATG GCACTCCATT
GATTGGAAGG CCGTCATGCA GTTCGTCGGA AAGGCGCAGA TGCGCATAGC GCAGGCAGAA
ACGGAGAAGG ATTTCCGAAG GGTCGCAAGA CTCAGAAGGA GTCTGATCCG ATCCTGGCAA
GCCAAGGCAT TGGCAGTCAG GCGAGTAACG GAAAACCAAG GGAAGCGAAC GAGTGGCGTC
GATTGCGTAC TTTGGGACAC GCCAACAAAG AAATGGAATG CGATAGGTTG TCTGAACCCC
AAAGGGTATC GGGCTCGCCC CCTAAGGCGG GCCTATATCC CGAAGGCCGA CGGAAAGCAA
CGCCCTCTGG GCATGCCGAC TATGAAGGAC CGAGCGATGC AAGCACTTTA TCTGCTTGCG
CTGGAACCGG CTGTGGAATG TGCGTCCGAT CCGAACTCGT ATGGGTTTCG GAAAGGCCGA
TCAACACATG ATGCACGGTC TCAGTTGTTT GTATCTTTAT CCAGAAAGGT GTCAGCCACA
TGGGTACTCG ATGCGGACAT CTCAGGGTTC TTTGACAACA TCAACCACGA GTGGTTGCTG
AACAATGTCC ACATGGACAA AGTGATGCTG CGCAAGTGGT TGAAATCTGG AGTTGTTGAC
GCGGGTCAGC TCCAGCGCAC GGATGACGGT ACGCCGCAAG GCGGCGTCAT TTCGCCGACG
TTAGCGAACA TCACCCTCAA TGGGCTGGAA CCGGGGCTTA CGCAATTCCT GCGGGAAAAG
CTGGGAACCA CACTGGCAAA GAAAGGGAAG GTGAACGTGG TTCGGTATGC CGATGACTTT
GTGGTAACAG GGGACTCGAA AGAGTTACTT GAAAACACAG TCCAACCATG GATAGTTGAA
TTCCTGCGCG AGCGGGGACT GACGCTGTCC GCGGAGAAGA CGCGCATTGT GCATATTGAC
CAGGGTTTTG ATTTTCTGGG ATGGAGCTTC CGCAAATACG GGGGCAAGCT ACTCATCAAA
CCGAGTCAGA AAAACGTGAA AGCGTTTTAT GGCAAGGTCA AGAAAATCAT CGCCAAATCG
GACTCGAAAC TTCCAACCGA AACGCTGATA AAGCGCCTGA ATCCAGTCCT CAAAGGCTGG
GCTCAGTACC ACAAGGGCAC GGTTGCAAAG CAGACTTTCA GCAAAGTAGA TCACCTGATT
TATTGGAGAT TAACGCGCTG GGGTTTACGC ACGCATCCCC GCAAATCCGG GAAGTGGGTG
TATGCCCATT ACTGGAAGCA GTGTGGTTCA CGCCGCCTGT TTGCGGGGTT GCAAGATGAC
CCATCTGGGG GTGACGAAAG AATACCGCTT CCGCTGTATT CCTTGGCGGA CATGAAAATT
GTTCGCCACG TCAAAGTGAA GGGGGATTAC AACCCTTTCC ACCCCGACTG GGTTACCTAC
GGGGAAAAAC TGCGAGTGCA ACGAATGGGT GAAACCATTT GGAGCGCTCA AAGGGCCTCT
CTGTGGTTCG ACCAAGGTGG TAAGTGCGCT CTCTGTGAGC AAGAAATAGA CATAGCTGAT
GAAAACATGG ACGACCACCA TATCGTCTAT CGGCAGCTAG GAGGGAGTGA TGCTCTTTCC
AATCGGGTGC TGTTACACCC GATCTGTCAC AGGCGTGTCC ACGCCCTAGG TTTGAAGGTT
ATCAAGCCGG TCCCAGCACG GGGACTTTAA
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| Protein sequence | MEHIGNDAAS PGESSEWHSI DWKAVMQFVG KAQMRIAQAE TEKDFRRVAR LRRSLIRSWQ
AKALAVRRVT ENQGKRTSGV DCVLWDTPTK KWNAIGCLNP KGYRARPLRR AYIPKADGKQ
RPLGMPTMKD RAMQALYLLA LEPAVECASD PNSYGFRKGR STHDARSQLF VSLSRKVSAT
WVLDADISGF FDNINHEWLL NNVHMDKVML RKWLKSGVVD AGQLQRTDDG TPQGGVISPT
LANITLNGLE PGLTQFLREK LGTTLAKKGK VNVVRYADDF VVTGDSKELL ENTVQPWIVE
FLRERGLTLS AEKTRIVHID QGFDFLGWSF RKYGGKLLIK PSQKNVKAFY GKVKKIIAKS
DSKLPTETLI KRLNPVLKGW AQYHKGTVAK QTFSKVDHLI YWRLTRWGLR THPRKSGKWV
YAHYWKQCGS RRLFAGLQDD PSGGDERIPL PLYSLADMKI VRHVKVKGDY NPFHPDWVTY
GEKLRVQRMG ETIWSAQRAS LWFDQGGKCA LCEQEIDIAD ENMDDHHIVY RQLGGSDALS
NRVLLHPICH RRVHALGLKV IKPVPARGL
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