Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0948 |
Symbol | radC |
ID | 4011082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 969681 |
End bp | 970415 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637940628 |
Product | DNA repair protein RadC |
Protein accession | YP_547802 |
Protein GI | 91786850 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.455823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.486956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGGA GAAAAGCCGG ATTTGCCCCG CTCCCCCTCC CTGATCGGAC CCCTTCCCCC ATGCTGCTGA AAGACCTGCC CGAGGACGCC CGCCCCCGAG AAAAACTGCT GGCCCGCGGC CCCGCCGCCC TCAGCGATGC CGAACTGCTG GCGCTGCTGC TGCGCACCGG CCTGCCCGGC AAGAATGCGC TGCAGATGGG CCAGGAACTG GTGGACACCT TCGGCGGCGT GGCCGGGCTG CTGCATACCG GGCCCGAAGC GCTCAAAAGC ATCAAGGGCC TGGGCCCGGC CAAACGGGCC GAGCTGGTTG CGGTGCTGGA GCTGGCCCGC CGCGCGCTGG CCGAAGAACT GAAGGAAAAG GCGCTGTTTT CCACGCCGCA GGCCGTGCGT GACTATTTGC AGCTGCAGCT GGGCGGCCGG CCGCACGAGA TCTTTGCCGT GCTGTTCCTG GACAGCCAGC ACCGGCTGAT TGCGCTGGAA GAGCTGTTTC GCGGCACGCT GACGCAGACC AGCGTCTACC CGCGCGAAGT CGTGGTGCGG GCACTGGCGC TGAACGCCGC CAGCGTGGTG CTGGCACACA ACCACCCGAG CGGCGCCGCC ACGCCCTCCC GCGCCGACGA GGCATTGACG CAAACCCTCA AGTCCGCGCT GGCGCTGGTG GATGTGCGCG TGCTCGACCA TTTTGTGGTG ACAAGTACCC AGGCGGTGTC GATGGCCGAG CTGGGACTGC TATAA
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Protein sequence | MSGRKAGFAP LPLPDRTPSP MLLKDLPEDA RPREKLLARG PAALSDAELL ALLLRTGLPG KNALQMGQEL VDTFGGVAGL LHTGPEALKS IKGLGPAKRA ELVAVLELAR RALAEELKEK ALFSTPQAVR DYLQLQLGGR PHEIFAVLFL DSQHRLIALE ELFRGTLTQT SVYPREVVVR ALALNAASVV LAHNHPSGAA TPSRADEALT QTLKSALALV DVRVLDHFVV TSTQAVSMAE LGLL
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