| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0917 |
|---|
| Symbol | |
|---|
| ID | 4011032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 934135 |
|---|
| End bp | 935082 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637940597 |
|---|
| Product | respiratory-chain NADH dehydrogenase, subunit 1 |
|---|
| Protein accession | YP_547771 |
|---|
| Protein GI | 91786819 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0650] Formate hydrogenlyase subunit 4 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.941707 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTCT CCGGCTTTCT GTCGCAGTTG CTCGAGATCA TCCTCGCGAT CTCGATGGCG
CCGTTGCTGA CTGGCTGGGT CAACCAGTGG CGTGCCTGGC TGCAGAACAA ATCCGCGCCC
AGCCTCTGGC AACCCTACCG GATGCTGCAC AAGCTGTTCA ACAAGGAATC GATGGTGGCC
GACAGCGCAT CGCGCCTGTT TCGCATCGCG CCTTACGTGG TGTTTGGCTG TATGGTGCTG
GCATGCTCGA TCATCCCCAC CGTCTCCACA GACCTGCCAC TGGCGACGGC GGCCGATGCG
ATCGCGCTGG TCGGCCTGTT TGCGCTGGCG CGCGTGTTCA TCTCGCTGGC CGCCATGGAC
ATCGGCACTG CCTTCGGCAC CATGGGCGCG CGACGCGAGA TGCTGATCGG CTTTCTGGCC
GAGCCGGCGC TGTTGATGGT GCTGTTCTCG GCATCGCTCA TTTCAAAATC GACCTCGCTC
ACCACCATCG TCGAGACGCT CGCCCATCGC GAACTGGCCA TCTACCCTGG CCTGGCCTTT
GCCGGCGTTG CATTCACGAT GGTGTCGCTG GCGGAGAACG CCCGCGTACC GGTCGACAAC
CCCGCCACGC ACCTGGAACT GACGATGATC CACGAGGCGC TCATCCTGGA ATACTCGGGC
CGCCACCTGG CGTTGATCGA GTGGGCGGCC AGCCTGAAGC TGTTCGCCTA CTCGTGCATC
GGCCTGGCGC TGTTTTTCCC CTGGGGCGTG GCCGAGGCCC AGGCCCCGCT GGCCATGCTG
CTGGCACTGC CCGTACTGGT GTTCAAGCTC GCCGTCGGTG GCTTCCTGCT TGCCGCGCTG
GAGGCGTTCT CCGCCAAGAT GCGCATCTTC CGCGTTCCCG AGTTCCTGGC CACCGCCTTC
CTGCTGGCGG TGATCGGAAT GCTGGTGCAA CTGCTGCTCG GGCAATGA
|
|---|
| Protein sequence | MTFSGFLSQL LEIILAISMA PLLTGWVNQW RAWLQNKSAP SLWQPYRMLH KLFNKESMVA
DSASRLFRIA PYVVFGCMVL ACSIIPTVST DLPLATAADA IALVGLFALA RVFISLAAMD
IGTAFGTMGA RREMLIGFLA EPALLMVLFS ASLISKSTSL TTIVETLAHR ELAIYPGLAF
AGVAFTMVSL AENARVPVDN PATHLELTMI HEALILEYSG RHLALIEWAA SLKLFAYSCI
GLALFFPWGV AEAQAPLAML LALPVLVFKL AVGGFLLAAL EAFSAKMRIF RVPEFLATAF
LLAVIGMLVQ LLLGQ
|
|---|
| |