| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0820 |
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| Symbol | mscL |
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| ID | 4011378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 842733 |
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| End bp | 843188 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637940498 |
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| Product | large-conductance mechanosensitive channel |
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| Protein accession | YP_547674 |
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| Protein GI | 91786722 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.577469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCACC AACAACAGGA GTTGCACATG GGAATGATGC AGGAATTCAG GGAATTTGCG
GTCAAGGGCA ATGTGATCGA TCTGGCAGTG GGCGTGATCA TAGGCGCGGC GTTCAGCAAG
ATTGTCGAAT CCGTGGTGGG TGACCTGATC ATGCCGGTCG TGGGTGCCGT GGTAGGCAAG
CTGGATTTTT CCAACCTGTT TGTGGTGATG GGCAGCGTGC CGCCGGGCAC CGCCATGACG
CTGGACGCCC TGAAAAAGGC CGGCGTACCG GTGCTTGCCT ATGGCAACTT CATCACCGTC
GCCGTCAACT TTGCCATCCT GGCCTTCATC ATTTTCCTGA TGATCAAGCA GATCAACCGG
CTCAAACGCC GCCAGGAGAC CCAGCCTGCG GCGCCCGCAA CACCACCCGA AGACGTCATG
CTGCTGCGCG AAATTCGCGA CAGCCTGAAG AAATAA
|
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| Protein sequence | MIHQQQELHM GMMQEFREFA VKGNVIDLAV GVIIGAAFSK IVESVVGDLI MPVVGAVVGK
LDFSNLFVVM GSVPPGTAMT LDALKKAGVP VLAYGNFITV AVNFAILAFI IFLMIKQINR
LKRRQETQPA APATPPEDVM LLREIRDSLK K
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