Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0817 |
Symbol | |
ID | 4011375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 839348 |
End bp | 840502 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637940495 |
Product | peptidase S1 and S6, chymotrypsin/Hap |
Protein accession | YP_547671 |
Protein GI | 91786719 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family [TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCA CCTGGCTCCT GTTTTCCCAG ACCGTCACTG TTCTGGTGGC CGCCTATTTT GTCGTGGCAA CGCTCCAGCC GCAGTGGCTG GGGACCTCGT CGATCGGCGG GGTTTCCGTG ATCGAAGCAC CGGCCAGCAG CGTGCAACTC GGTCCAAGAC CGGCCGGCAC CTTCAGTTCG GCCGCGAAAA TCGCCTCGGC GGCGGTGGTC AGCATCAACA CCAGCAAGGC CGCCGTCAAT AACCCGCATG CCGACGATCC GTGGTTCAAG TTTTTCTTCG GCGACCAGGG CCGCAGCGAA CCCCAGGGCG GCCTGGGCAG CGGGGTCATC ATCAGCGCCA CCGGCTATAT CCTGACCAAC AACCATGTGG TCGAAGGCGC TGACGAGATC GAGGTCATCC TCAACGATAC GCGCAAGGCC AAGGCCCAGG TGATAGGCAC CGACCCCGAC ACCGACCTGG CCATTCTCAA GATCAACCTG GACAAGCTGC CCGTCATTGT CCTGGGCAAC TCCGACGCAC TGCAAATAGG CGACCCGGTG CTGGCCATAG GCAACCCTTT CGGCGTGGGC CAGACCGTGA CGGGTGGCAT CGTGAGCGCA CTCGGGCGCA ACCAGCTCGG CATCAACACC TTCGAGAACT TCATCCAGAC CGATGCGGCC ATCAACCCCG GCAATTCAGG CGGGGCGCTG GTCGACGTGA ACGGCCACCT GATGGGCATC AACACCGCCA TTTACTCGCG CTCGGGCGGC TCCATGGGCA TCGGCTTTGC CATCCCGGTG TCCACGGCCA AGCAGGTGCT TGAGGGGATC GTGAAAGACG GGCAGGTCAC GCGCGGCTGG ATTGGCGTGG AACCGCAGGA GCTCAATGCC GAACTGGCTG AGACCTTCAA TATCAAGCCC GCGGCGCTGA AGGATGGCGG CGTGATCATC ATCGGCGTGC TGCAAAACGG CCCGGCCGCG CAGGCGGGCA TCCAGCCCGG CGACGTGATC ACCGCGGTCA ACGGCAAGTC CGTGAGCAAT GTGAGCCAAC TGCTGACCGC CGTAGCCGCG CTGAAGCCCG GCACGCCGGC CCCCCTGACC GTATGGCGCC GGGATCGCCA GACCGACATT GCGGTCACAC CCGGCAAGCG CCAGCGGCCC AGGGTGCAGC GCTGA
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Protein sequence | MKRTWLLFSQ TVTVLVAAYF VVATLQPQWL GTSSIGGVSV IEAPASSVQL GPRPAGTFSS AAKIASAAVV SINTSKAAVN NPHADDPWFK FFFGDQGRSE PQGGLGSGVI ISATGYILTN NHVVEGADEI EVILNDTRKA KAQVIGTDPD TDLAILKINL DKLPVIVLGN SDALQIGDPV LAIGNPFGVG QTVTGGIVSA LGRNQLGINT FENFIQTDAA INPGNSGGAL VDVNGHLMGI NTAIYSRSGG SMGIGFAIPV STAKQVLEGI VKDGQVTRGW IGVEPQELNA ELAETFNIKP AALKDGGVII IGVLQNGPAA QAGIQPGDVI TAVNGKSVSN VSQLLTAVAA LKPGTPAPLT VWRRDRQTDI AVTPGKRQRP RVQR
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