| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0800 |
|---|
| Symbol | |
|---|
| ID | 4011143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 826765 |
|---|
| End bp | 827520 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637940478 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_547654 |
|---|
| Protein GI | 91786702 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1511] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.200073 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCT GGCAAACCCT TTTTTACAAG GAAGTCCTGC GCTTCTGGAA GGTCGGCTTC
CAGACGGTGG GCGCGCCGGT GCTGACCGCG GTGCTCTACA TGCTGATTTT TGGCCACGTG
CTGCAGGACC AGGTGAAGGT GTACGACCAG GTGAGTTACA CCGCCTTTCT GGTGCCTGGC
CTGGTGATGA TGAGCGTGCT GCAAAACGCC TTCGCCAACA GCTCGTCGTC GCTGATCCAG
AGCAAGATCA TGGGCAGCCT GGTGTTTGTG CTGCTGACAC CGCTGTCGCA CTGGCACTGG
TTTTTTGCCT ATGTGGGCTC GTCGATCGCA CGCGGCCTGC TGGTGGGCAT GGGCGTGTTT
GCCGTCACCG TTTTTTTTGG TCAGCCCGGC TTTGTGGCGC CGTGGTGGAT CGTGCTGTTT
TCGGTGCTGG GCGCGGCCAT GCTGGGTGCC CTGGGTGTGA TCGCGGGGCT ATGGTCTGAA
AAATTTGACC AGATGGCGGC TTTCCAGAAT TTCGTCATCA TGCCCATGAC TTTCCTGAGC
GGCGTGTTTT ACTCGATCCA TTCACTGCCG CCGTTCTGGC AAAAGGTCAG CCACCTGAAC
CCGTTCTTTT ACATGATTGA CGGTTTCCGC TACGGATTTT TCGGGGTCAG CGATGTGTCG
CCCTGGCTGA GTCTGGGCAT CGTGCTGGTT GCGCTGGCCA TCGTCAGTGC TGTCGCGGTC
AATATGCTGC GCACCGGCTA CAAAATCAGG CACTAG
|
|---|
| Protein sequence | MTGWQTLFYK EVLRFWKVGF QTVGAPVLTA VLYMLIFGHV LQDQVKVYDQ VSYTAFLVPG
LVMMSVLQNA FANSSSSLIQ SKIMGSLVFV LLTPLSHWHW FFAYVGSSIA RGLLVGMGVF
AVTVFFGQPG FVAPWWIVLF SVLGAAMLGA LGVIAGLWSE KFDQMAAFQN FVIMPMTFLS
GVFYSIHSLP PFWQKVSHLN PFFYMIDGFR YGFFGVSDVS PWLSLGIVLV ALAIVSAVAV
NMLRTGYKIR H
|
|---|
| |