Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0789 |
Symbol | |
ID | 4011171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 812438 |
End bp | 813589 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637940467 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_547643 |
Protein GI | 91786691 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.394286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.786087 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCCCA ATCGGCGTCA ATTAATTCTG GGTAGCGTGT GCGCGGGTGC CTTGGTGGCA AGTCCCGCGC TTCGGGCACA AACTGCCAAA ACTGCGCGCA GGGTGGTCGT GGGCCAGTCC GTGCCGCTGA CGGGCGCGGC AGACCAGATC GGGCTGGCTT ACCTCAACGG CGCGAAAATT TGCTTCGATG CCATCAATGC GAAAAACGGT GCGGGCGGCT ACAAGATCGA CGTCAAGGCG CTGGATGATG GCTACGACCC TGCCAGAGCT GCCAACAATG CCAGGCAGCT GATGGATCAA GGCGTTGACG CGCTGTTCGG TTTTGCCGGC ACGGCCAGTT GCGATGCCGC CTTTGCCGTG GCAAAGCCGG CGGGGGCCCT GTTTTTTGCC CCCTTTGCCG CCTCCGATGC GCTGCATGAT CCTGCCCTCG GCAATGTGTT CCATGTGCGG CCAGCCCTGG CGGATGAGGC TTACAAGGTG GTGCGCCACT GTGCCACGCT GAACCAGGAC CGCATCGCCG TGTTTGCCGA AGACGATGCC ATGGGGCGCG CTGGCCTGGC TGCCATCAAG CAGGCGCTGG TCGACCTCAA GCGTCCACCG ATCGTGGCCA GTGCGCTGTC GCCGGTCAAT AGCGACAAGG TTGATGCGGC AGTGGCCCAG CTGCTCAAGG CAGAGCCCCA AGCCATCATA CAGGTCAGCC TCTTCAATTC ATCGGCCGCC TTCATCCGCA AAATGCGCCG GGCCGGCTAT GGCGGCCAGT TCCTGAATTT TTCGGTGGTC GGCATAGACC CGCTTTTCAG TGCGCTGGGC AAAGAGATTG GCGGCATCGT CATTTCACAG GTGGTGCCTT CGCCGCGCAG CACCGGCACA CCCATCATCA AGGAATACCT GGACGTGCTG AACCAGACCG ACCAGACGCC CAGTTACGAA AGCGTGGAGG GCTACATCGC TGCCCGCACA TTTGCCGAAG GCGTGCGCCG CAGTGTCTCG GGCGGTGGCA GGCCGGACCG TCCTGGCCTG CAAAAAGCCT TTGAATCCAT GACGGACTAT GACGTGGGTG GTTTTCGTAT CAACCTGCGC GCCAAAAAGT ATGAGTCCGT GCGTGCGATA GACCTGGTCA GCATCACGCC GGACGGCAAG GTCATTCGGT AA
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Protein sequence | MVPNRRQLIL GSVCAGALVA SPALRAQTAK TARRVVVGQS VPLTGAADQI GLAYLNGAKI CFDAINAKNG AGGYKIDVKA LDDGYDPARA ANNARQLMDQ GVDALFGFAG TASCDAAFAV AKPAGALFFA PFAASDALHD PALGNVFHVR PALADEAYKV VRHCATLNQD RIAVFAEDDA MGRAGLAAIK QALVDLKRPP IVASALSPVN SDKVDAAVAQ LLKAEPQAII QVSLFNSSAA FIRKMRRAGY GGQFLNFSVV GIDPLFSALG KEIGGIVISQ VVPSPRSTGT PIIKEYLDVL NQTDQTPSYE SVEGYIAART FAEGVRRSVS GGGRPDRPGL QKAFESMTDY DVGGFRINLR AKKYESVRAI DLVSITPDGK VIR
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