Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0786 |
Symbol | aroK |
ID | 4011168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 809207 |
End bp | 809731 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637940464 |
Product | shikimate kinase |
Protein accession | YP_547640 |
Protein GI | 91786688 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.549744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAATAG CCTGTGTGGG CCTGCCGGGA TCGGGAAAGT CCACGGTGGG CAGGCAGCTT GCCCGCAGGC TGGGTTTGCC ATTCGTTGAT TCAGACCAGG TCATAGAGCA GCGTATCGGC TGCTCCATTC GCGAGTTTTT TGAGCGTGAG GGCGAGGCTT CATTCCGTGA TCTTGAACAG CTGGTCATCG ATGAGTTGAC CCAAGGAGGG GCCTGTGTGC TCTCCACCGG CGGCGGTAGC GTGCTCCGCC CTGTGAACCG CGAGCATTTG CGGGGGCGGG CGCAGGTCGT ATATTTGCAT TCGGCGCCGG AAGAGGTTTT TCGGCGCTTG CGGCATGACC AGAACCGGCC GCTGCTTCAG GTCGCTGATC CACTGGCCCG ATTGCGCGAT CTTTACATCG CACGCGATCC GCTGTATCGG GAAACCGCCC AATTCGTGAT TGAAACCGGC CGTCCTTCGG TGTCCACCCT GGTGAACATG ATCCTCATGC AGCTGGAACT GGCGGGCGTG GTTCCTGCGC CTTAG
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Protein sequence | MKIACVGLPG SGKSTVGRQL ARRLGLPFVD SDQVIEQRIG CSIREFFERE GEASFRDLEQ LVIDELTQGG ACVLSTGGGS VLRPVNREHL RGRAQVVYLH SAPEEVFRRL RHDQNRPLLQ VADPLARLRD LYIARDPLYR ETAQFVIETG RPSVSTLVNM ILMQLELAGV VPAP
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