Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0782 |
Symbol | |
ID | 4011164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 804953 |
End bp | 805636 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637940460 |
Product | fimbrial assembly |
Protein accession | YP_547636 |
Protein GI | 91786684 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3166] Tfp pilus assembly protein PilN |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0125295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTCTGA TCAATCTGCT CCCGCACCGG GAGGCTGCGC GCAAACGCAG GCGCGAGGTG TTTTATGCGA CCTTGGGCGT TGCCGCGCTG GCGGGTGTGC TGATTTCCGG CGCTGTGTAC ACCTGGTATC TGGCTCAAAT TGAAAGTCAG CAGACAAAAA ACAACTTTCT GAAAACGGAA ATCACCCGTC TTGAAGGTCA GATCAAGGAG ATCGCAACCT TGCAGGCGGA GATCGCCGCG CTGAGGGCTC GCCAGAATGC AGTGGAAGAT TTGCAGGGAA ACCGCAACCT GCCGGTTTAC CTGCTCAGTG AATTGGTCAA GCAATTGCCT GATGGCGTCT ATATCAACAG CATGAAGCAG GACAACCAGA CCGTCCTGAT CATCGGTGTT GCGCAATCCA ACGAGCGGGT TTCCGAACTG TTGCGCAATC TGGCCAACAA CAGCCCCTGG TTGACCAAGC CGGAACTCGT GGAAATCACC GCCGGCTCGG TCACGCTGAG CCAGCGTGAC CAGCGGCGGG TAGCCAACTT CTCCATGCGC GTGGGGCTCA AACGGGCCAG TGATCCGAAA GCTGCAAGTT CTGCGGCCTC AAGTTCAGTA GCTGGGCCTG CGCTTCCTGC GGCGTCTTCT GCCGTAGCCA AGCCAGCTCC CGTCGCCTCG GCGTCGGCAG CGGCCAAGAT ATGA
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Protein sequence | MILINLLPHR EAARKRRREV FYATLGVAAL AGVLISGAVY TWYLAQIESQ QTKNNFLKTE ITRLEGQIKE IATLQAEIAA LRARQNAVED LQGNRNLPVY LLSELVKQLP DGVYINSMKQ DNQTVLIIGV AQSNERVSEL LRNLANNSPW LTKPELVEIT AGSVTLSQRD QRRVANFSMR VGLKRASDPK AASSAASSSV AGPALPAASS AVAKPAPVAS ASAAAKI
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