| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0777 |
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| Symbol | |
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| ID | 4011159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 799046 |
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| End bp | 800329 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637940455 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_547631 |
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| Protein GI | 91786679 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACC ACAAACTCCC CGGCCACCCC CATTTTGCGT ACCGTGGCAA TGACCTGTTT
GCCGAAGACC TGATGGTCAG CGAGTTGGCG AGCCTGCACG GCACACCGCT ATTTGTTTAC
TCCAAAGCGG CGATGCTGTC GGCCCTGGCC GCTTACCAGC GCGGCTTTGC GGGGCGCGAT
GTGCAGATCT GCTATGCCAT GAAGGCCAAC TCTTCGCTGG GCGTGCTGCA AGTGTTTGCC
GGGGCCGGCT GCGGTTTCGA CATTGTCTCG GGCGGCGAAC TGGAACGTGT GCTCGCTGCA
GGCGGCCAGG CCAACAAGAT CATCTTCTCC GGGGTCGGCA AGACGCGGGC CGAGATGCGG
CAGGCGCTGG CGGCTGGCAT TGGCTGCTTC AACGTAGAGA GCGAGGCCGA GCTGGACGTG
CTGTCAGGCG TTGCTGCGGC GATGAACTTG CGTGCGCCGG TAAGCATTCG CGTCAATCCG
AATGTCGACC CCAAGACCCA TCCCTATATT TCCACGGGCC TCAAGGGCAA TAAATTCGGC
GTCGCCCATG AGGATGCCCT GCGCATTTAC CAGCACGCGG CGGCCTTGCC CGGCTTGCAG
GTTGCGGGTA TCGACTGCCA CATTGGCTCG CAGATCACCG AAACCACACC CTACCTCGAC
GCGATGGACC GGGTGCTGGA CCTGGTCGCG TCCATTGAAA GCGCAGGCAT AGAGCTGGAG
CACATCGACT TCGGCGGCGG CCTGGGCATC AATTACAACG GCGACACCCC GCCCGAAGCC
GACGTGCTCT GGCGGCAACT GCTGGCCAAA CTCGACGCGC GCGGCTACGG CAGCAAGAAA
CTGATGATTG AACCGGGCCG CTCGCTGGTG GGCAATGCCG GCATCTGCCT GACCGAGGTG
CTCTACCTGA AACCCGGCGA GCAGAAAAAC TTCTGCATCA TTGATGCGGC GATGAACGAC
TTGCCGCGAC CGGCGATGTA CCAAGCTTTT CACGCCATCG TGCCGGCGGT GGCCGGCGGT
CCCGCCCCCG CCACGACGTA TGACGTGGTC GGCCCGGTCT GTGAGAGCGG CGACTGGATA
GGCCGTGACA GGCCTCTGGC GGTCAACGCG GGCGACGTGC TGGCCGTGCT GTCAGCGGGC
GCTTACTGCA TGAGCATGGC CAGCAACTAC AACACGCGCG GCCGCGCTGC CGAGGTGCTG
GTCGACGGCA GCCAGGCGCA CCTGATACGC CGCCGCGAAG ATGCGCAGGA CCAGATGCGC
CATGAGCAGC TGGTGGCCGA ATAA
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| Protein sequence | MTDHKLPGHP HFAYRGNDLF AEDLMVSELA SLHGTPLFVY SKAAMLSALA AYQRGFAGRD
VQICYAMKAN SSLGVLQVFA GAGCGFDIVS GGELERVLAA GGQANKIIFS GVGKTRAEMR
QALAAGIGCF NVESEAELDV LSGVAAAMNL RAPVSIRVNP NVDPKTHPYI STGLKGNKFG
VAHEDALRIY QHAAALPGLQ VAGIDCHIGS QITETTPYLD AMDRVLDLVA SIESAGIELE
HIDFGGGLGI NYNGDTPPEA DVLWRQLLAK LDARGYGSKK LMIEPGRSLV GNAGICLTEV
LYLKPGEQKN FCIIDAAMND LPRPAMYQAF HAIVPAVAGG PAPATTYDVV GPVCESGDWI
GRDRPLAVNA GDVLAVLSAG AYCMSMASNY NTRGRAAEVL VDGSQAHLIR RREDAQDQMR
HEQLVAE
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