| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0757 |
|---|
| Symbol | |
|---|
| ID | 4011178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 776485 |
|---|
| End bp | 777348 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637940435 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_547611 |
|---|
| Protein GI | 91786659 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.207511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.941707 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGTCG CGAAGGCTTG CCGCCACTGG GGCGTCAGCC GCCAGGCCTA CTACCAGCAG
TTGCAGCATG ACCGGCACCG CTGTGAGCGT GCGGACACCG TGATCGAGCT CGTGCGCTCG
GTGCGGCTGC GCCAGCCGAG GATAGGCACG CGCAAGCTGC ACCACATGCT CAGCCAGCCC
CTGGGACAGG CGCAGGCCAG CCTGGGGCGC GATGCGCTGT TTGACGTGCT GCGCCAGGCC
CGCCTGCTGG TGGCGCCCAG CAGGGCGTAT CACAAGACGA CCAACAGCTG CCACCGGTTT
CACCGGCACC CGAACCTGCT CAAGGCGGGG CCCCGGCAAG TGCGCCCGAG CGCTGGCGAG
CAGGTCTGGG TGGCCGACAT CACCTACCTG CCGACCGACC AGGGGTTCGT CTACCTCAGC
CTGGTCACGG ATGCCTGGTC ACGCAAGATC GTCGGGCACC ACGTGCATGA CAGCCTGCGC
ACAGAGCAGG TCAGCCAGGC CTTGAAGACG GCGCTCAAGG GCCGGCAGAC CAGGCAGGCG
CTGGTGCATC ACTCGGACCG CGGCATCCAG TACTGCTCGA GCGAGTATCA GGCGATTCAC
GCGCGCCACG GCATTGTGTG TTCGATGACC GATGGCTACG ACTGCTACCA GAATGCGCTG
GCCGAGCGCG TCAACGGGAT TCTGAAGATG GAGTTCCTGC TTCAAAGACC GGCCGACCTC
GATCAGGCCA GAAAAATGGT TCAGCAATCC GTGCATATCT ACAACCAGGA AAGACCACAC
CTATCCCTAC AATTGAAAAC GCCCGGTGAG GTTCACCGGG CGTCTCTGGC TGGCCTTCAC
GGCTCAGCTA TTTGTGTTTC ATAG
|
|---|
| Protein sequence | MSVAKACRHW GVSRQAYYQQ LQHDRHRCER ADTVIELVRS VRLRQPRIGT RKLHHMLSQP
LGQAQASLGR DALFDVLRQA RLLVAPSRAY HKTTNSCHRF HRHPNLLKAG PRQVRPSAGE
QVWVADITYL PTDQGFVYLS LVTDAWSRKI VGHHVHDSLR TEQVSQALKT ALKGRQTRQA
LVHHSDRGIQ YCSSEYQAIH ARHGIVCSMT DGYDCYQNAL AERVNGILKM EFLLQRPADL
DQARKMVQQS VHIYNQERPH LSLQLKTPGE VHRASLAGLH GSAICVS
|
|---|
| |