| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0756 |
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| Symbol | |
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| ID | 4011177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 774486 |
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| End bp | 776429 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637940434 |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_547610 |
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| Protein GI | 91786658 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.745695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTCA ATTACTCTTT CTCATACTTC ATGCAAAAAC CAATCCGCTA CAGCCTGACC
GCCGCTGCCT GCCTTCTGGC CTTTTCGGCC CAGGCCCAGC TCATCAGCAA TCTCTACTCT
GTCGGCGACA GCCTGACCGA TGCCGGCACC TATGCGCCGA CCACGCAATT GTTCGTACCC
GATTCCGGCC GCTTCACCAC CAACCCTGGC CTGGTCTGGA CGCAGTACCT GGGCCAGTCG
CTGGGGCTTT CCAGCGAGGC GGCGATCGTC AATCAATTTG GCGCACCGAC CCGGACGCCC
AACGGCGGAA CCAACTATGC GCAGGGCGGT TCGCGCGTCT TGCTGAGCCC TGGCGTGGGA
GTCGGTGCCG GCGTCTGGTT TACGGCCGAC CCGGTCAGCA GCCAGGTTGA CCGCCTGCTG
GCCGACACCG GCGGCCGCAT TGACGGCAAA GCCCTGGTCA CGGTCTGGGC GGGAGCCAAC
GACGTACTTA CCCAATATGG CGCGGTGGGC TTGGGCTTGC CGGTGCCCTC GGCGCTGGGC
AATGTCGGCA CCTCGGCCGG CGACCTCAAC GCCCAGATCA TGCGCCTGCA GGCGGCGGGG
GCCAAACTGA TCCTCGTCAA CACACTGCCG GATCTGGGTG TCACGCCATT CGGACTTTCT
CAAGGGCCGG CGGGCGCCGG CTTGCTGACG GCGATGTCTG ACACCTTCAA CCAGCAACTG
CTACAGGCCA CCGCCGGGCG CAATGTGCTG GTGTTTGACA CCAACAGGGT GCTCAACGAT
CTGCGGGCGC GGCCGGCTGC ATACGGCTTT ACCGCACTGA ATGCGGCGAC CCAGCCGGCC
TGCCTGCCGT CCGGCAGCTC ATCGCTCCTG TGCGTCAATC CCCCGGAGGC CGATACCTAT
GTGTTCGCCG ATGGGGTGCA TCCGACCTCG GCAACGCACA AGGTCTTTGC CCAGGTGACG
CTGGCAAGCA TGCGTGCCGC AGGCCAGAAC AGCACGCTGG CGGTCGCGCC CCTGGTGGCC
ATCCGGCAGC ATGCGCAAAC GCTGGAAGGG CGCCTGACAT CGGGTGCGCT GGTGGTCGAG
CAGCCCGATG ACAGCAAAAT CGTGCTTCGT CCAAAGGGTC ATCTTGAGAT GTACACCGCG
CTGGAGAGCG GCCGCTTTGG TGCTTCGACG CTGGGCGTGC GCATGGGCAA CGAAGCCAAA
ACCACCGTGG TGCTGGTCGG CGGCGACATC ACGCTGGCGC CCAATGCACT GGCCGGGCTG
GTGCTGTCGC ATGCGGAGGG CGATTTGTCA TTCTCCGAAA ACACCGGCGG CTTCAAGACC
CGGCAGACCA CCGTCGGTAC CTATGCTACC GTGGCCCTGT CGCCCGAGTG GTACCTGAAT
GCGGCGCTGG CTTACGGCGA CCTTGACTTT GACAACATTC ACCGCGATGT GCGGCTGGGA
TCCACGCAGT TGCTGGTGTC CTCGACGGGA CAAACCACCG GCAGCTATGC GTCAGCGCGC
GTGGGCGGCG GCTACATCTT GAAGGCGGGC CGGTTCTTTG GCGGTCCCAC GCTGTCGCTG
ACCGAAGAGC GCGTGAAGGT GAAGGCTTAC ACCGAAGCGC CCGGCCCGCT GGCCTTCAGC
TTTGGCGATA CCACATACAG GTCACGACGC GTGTCACTGG GTTTCAATGG CACTTACGAC
GTGGGGCGCA TCAAACCCTT TGCCCGTGTG AGCCTGGAAA AAGACCTGAA CCATGACCCC
TTGCGCGTGA CGATGGGCAG CTATGCGAGC AACGCCATCA CCGTCGATGG CGACAGGCCG
GATGGCTTGT TTGCGCTGGC AACGCTGGGC GTCAAGGGCC TGCTGGGCGG TGGCATGCAA
TGGAGCCTGC TGTACAGCAC CACTGTGTCG CAAAACGACA TCCGCGGCTG GTCGGTGGGC
GCAGCCCTGC AAGTACCTTT TTAA
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| Protein sequence | MTLNYSFSYF MQKPIRYSLT AAACLLAFSA QAQLISNLYS VGDSLTDAGT YAPTTQLFVP
DSGRFTTNPG LVWTQYLGQS LGLSSEAAIV NQFGAPTRTP NGGTNYAQGG SRVLLSPGVG
VGAGVWFTAD PVSSQVDRLL ADTGGRIDGK ALVTVWAGAN DVLTQYGAVG LGLPVPSALG
NVGTSAGDLN AQIMRLQAAG AKLILVNTLP DLGVTPFGLS QGPAGAGLLT AMSDTFNQQL
LQATAGRNVL VFDTNRVLND LRARPAAYGF TALNAATQPA CLPSGSSSLL CVNPPEADTY
VFADGVHPTS ATHKVFAQVT LASMRAAGQN STLAVAPLVA IRQHAQTLEG RLTSGALVVE
QPDDSKIVLR PKGHLEMYTA LESGRFGAST LGVRMGNEAK TTVVLVGGDI TLAPNALAGL
VLSHAEGDLS FSENTGGFKT RQTTVGTYAT VALSPEWYLN AALAYGDLDF DNIHRDVRLG
STQLLVSSTG QTTGSYASAR VGGGYILKAG RFFGGPTLSL TEERVKVKAY TEAPGPLAFS
FGDTTYRSRR VSLGFNGTYD VGRIKPFARV SLEKDLNHDP LRVTMGSYAS NAITVDGDRP
DGLFALATLG VKGLLGGGMQ WSLLYSTTVS QNDIRGWSVG AALQVPF
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