| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0749 |
|---|
| Symbol | |
|---|
| ID | 4011306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 766073 |
|---|
| End bp | 767356 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637940427 |
|---|
| Product | peptidase M20D, amidohydrolase |
|---|
| Protein accession | YP_547603 |
|---|
| Protein GI | 91786651 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0878973 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.8802 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGCCG GCCGACCGGG CCAGCTGCGC GCCAGTGGCC GGGCCTTTGC GCAAATCTCG
CAGTTCCATC CGGAGTTGAC GGCTTTTCGC CGGGACCTGC ACGCCCACCC CGAACTGGGC
TTTGAAGAGG TCTATACCTC AAGCCGCGTG GCGCATGCGC TCAAACTATG CGGCGTGGAT
GAAGTGCACA CCGGCATTGC GAAAACCGGC GTGGTTGCCG TCATCAAGGG CCAGCAAACC
GGCACCGCGT TCACGTCCGG TGCCCGGCCC ATGGTGGGCT TGCGCGCCGA CATGGATGCC
CTGCCCATGA CGGAGCACAA CGAGTTTGGC TGGAAGTCCT CCAAAACCGG GTTGATGCAT
GGCTGTGGCC ACGATGGCCA CACCACCATG CTGGTAGGCG CCGCCCGCTA CCTGGCCGAG
ACACGCCATT TTGCCGGCGA TGCGGTGCTT GTTTTTCAAC CGGCGGAAGA GGGGCGCGGC
GGGGCAGAGG CCATGATCCA GGCCGGGCTG TTCGAGCGTT TTCCGGTGCA ATCGATTTAC
GCCATGCACA ACTGGCCCTC CATGCGTCCC GGCACCATTG GCATCAATCC CGGGCCCATG
ATGGCTGCGG CCGACCGCGT CACCATCGAG ATTGCCGGCA AGGGCGGCCA TGGCGCACAT
GCCTACCTCA CGGTCGATCC GGTGCTGGTG GCCGCTCACA TCATCACGGC GGTGCAGAGC
ATCGTCTCGC GCAACGTGAA GGCCATGGAC AGCGCCGTGA TCAGCCTGTG CGCCATGCAC
GCGGGGGACC CCGGGGCGAT GAGCGTGGTG GCCGGCAGTG CCACGCTGGT GGGCACGGTG
CGCACCTTCA GGCCCGACGT GCAGAACCTG GTGGAGCGGC GCCTGCAGGA TTTGTGCACG
TCGGTGGCGC AGGGCTTTGG CGCCACGGCG ACGGTGACCT ACGAACGCAT TTATCCGGCC
ACCATCAACT CGCCCGCCGA GTACACATTG GCGACGGCCG TGGCCGACCA GCTTGTCGGC
CCGGAAAACG TGGTGCGCGA TCTGGAGCCC AGCATGGGCT CGGAAGATTT CTCTTTCATG
CTCCAGGTCA AGCCGGGCGC CTACCTGCGC CTGGGCCAGG GTGAGCAGCT CCCGGATGGC
AAGGGCGCCA GCATTGGCGG CGTGGGCAGC CGCTTTCTGC ACAACAGCTG CTACGACTTC
AACGACAGCG TGCTGCCGCT GGGCTCGGCC CTGTTTGCGG GGATTGTGGA ACGCTCCCTG
CCGCTCAAGC CTCAGGCGGT GTGA
|
|---|
| Protein sequence | MQAGRPGQLR ASGRAFAQIS QFHPELTAFR RDLHAHPELG FEEVYTSSRV AHALKLCGVD
EVHTGIAKTG VVAVIKGQQT GTAFTSGARP MVGLRADMDA LPMTEHNEFG WKSSKTGLMH
GCGHDGHTTM LVGAARYLAE TRHFAGDAVL VFQPAEEGRG GAEAMIQAGL FERFPVQSIY
AMHNWPSMRP GTIGINPGPM MAAADRVTIE IAGKGGHGAH AYLTVDPVLV AAHIITAVQS
IVSRNVKAMD SAVISLCAMH AGDPGAMSVV AGSATLVGTV RTFRPDVQNL VERRLQDLCT
SVAQGFGATA TVTYERIYPA TINSPAEYTL ATAVADQLVG PENVVRDLEP SMGSEDFSFM
LQVKPGAYLR LGQGEQLPDG KGASIGGVGS RFLHNSCYDF NDSVLPLGSA LFAGIVERSL
PLKPQAV
|
|---|
| |