| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0741 |
|---|
| Symbol | |
|---|
| ID | 4011298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 756781 |
|---|
| End bp | 757866 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637940419 |
|---|
| Product | nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase |
|---|
| Protein accession | YP_547595 |
|---|
| Protein GI | 91786643 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.320291 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA CCACCTCTTC CCCCCCTGTC TCCTCTTCTC ACCCGGCCCT GCACATTCCG
GCGATCGCGC CCATCGCCGA CGCCGTGCTG GCGGACCGGT TGCAGCGCAA GATCGACCAC
AAGACCAAGC CCGTGGGCGC ACTGGGCGCG CTGGAGGGCC TGGCGCTGCA GCTGGGCCTG
ATCCAGCGCC GCGACACCGT CACGCTGCAC GCGCCGCAAA TGGTGGTGTT TGCGGCCGAC
CACGGCATTG CCGCAGAAGG CGTGTCCGCC TATCCGCAGG CCGTCACCGT GCAGATGGTG
GGCAACATGC TGGCCGGCGG CGCAGCCATC AATGTGTTTG CGCGCCAGCA CGGCTTTGCA
TTGCACGTGG TCGACGCCGG CGTCGCCGCC GACCTGCCCG CGCATCCCCA GCTGCTGCAG
CGCAAGATCG CGCACGGCAC GCGCAACCTC TGCAGCGAGC CCGCCATGTC GCTGGCCGAG
GCCGATGCGG CGCTGCAGGC GGGCATGGCC GTCGTGCGGG CCCTGCCCGG CAATGTGGTG
GCGCTGGGCG AAATGGGAAT TGCCAACACC TCGGCGGCGG CCCTGCTATT TGCGCGGCTG
GCCGGCGCCA GCCTGGAGGA CGCCACCGGG CGCGGCACGG GCCTGACCGA CCCACAGTTG
CAGCACAAGC AGGGCGTGCT GCTGCGCGCC CTGGAACGCC ATGCTGATGC CACCCGGCCG
CTTGACGCGC TCGCCGCGCT CGGTGGTTTT GAAATTGCCA TGATGAGCGG CGCGATGCTG
CAGGCCGCCA GCGAACGCCG CGTGGTGCTG GTCGACGGTT TCATTGCCGG CGCCGCAGCG
CTGGTGGCCC ACGCGCTGGC GCCGCAGGTG CGCGACTACC TGGTGTTTTG CCACCGCTCG
GCCGAGCGTG GCCACGGCCT GCTGCTGGCC CACCTGAAGG CCACGCCACT GCTTGAACTC
GATCTGCGGC TGGGAGAAGG CACGGGCGCC CTGCTGGCCT GGCCGCTGGT GCAGTCGGCG
GCGCTGTTCC TGGACGAGAT GGCCAGCTTT GACTCGGCCG GCGTGAGTGG CAAGGAGAAC
CCCTGA
|
|---|
| Protein sequence | MTATTSSPPV SSSHPALHIP AIAPIADAVL ADRLQRKIDH KTKPVGALGA LEGLALQLGL
IQRRDTVTLH APQMVVFAAD HGIAAEGVSA YPQAVTVQMV GNMLAGGAAI NVFARQHGFA
LHVVDAGVAA DLPAHPQLLQ RKIAHGTRNL CSEPAMSLAE ADAALQAGMA VVRALPGNVV
ALGEMGIANT SAAALLFARL AGASLEDATG RGTGLTDPQL QHKQGVLLRA LERHADATRP
LDALAALGGF EIAMMSGAML QAASERRVVL VDGFIAGAAA LVAHALAPQV RDYLVFCHRS
AERGHGLLLA HLKATPLLEL DLRLGEGTGA LLAWPLVQSA ALFLDEMASF DSAGVSGKEN
P
|
|---|
| |