| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0720 |
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| Symbol | |
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| ID | 4011257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 732436 |
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| End bp | 734412 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637940398 |
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| Product | Type I secretion outer membrane protein, TolC |
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| Protein accession | YP_547574 |
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| Protein GI | 91786622 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein
[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000202106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAA AGAAGCAATT TTCACTGCTG ATGCTGGCAA TACTGGCTGG TCTGGGGGTA
CAGGCGCAAG CCCAGGCACC CGCCCAAACC CTGCCCGAGC CCATGATTGA CGCAGCCCGC
AAGGCGGTGG TCAGCAACCC CGAGGTGCAG GCCCGCTGGC ACGGCTTCCA GGCTGCCGGC
AACGAGCGCG ACGTGGCCCG TGGCGGCTAC TTTCCCCAGA TCGACCTGCG CGCCGGCACC
GGCCGCGAGA GCCGCGAGAC GCCATTGACC GACTATGGCC GTTACAACTT CCGTGGCACG
ACGCTCACGC TCAACCAGAT GCTGTTTGAC GGGCTGTTCA CGCCCAACGA GGTCAAGCGG
CTCGGTTATG CCAAGCTCAC CCGCTACTAC GAACTGCAGG AAGTCTCCGA GACCGCCGCG
CTCGAAGCCG TGCGCGCCTA CGCCGACGTC GTGCGCTACC GCGAGCTGGT CGATACGGCC
ACGCAAAACT ACGTCGTGCA CAAGCAGACC ACCGGCCAGG TCGAAGAGCG CTCCAGTGCC
GGCGTGGGCC GCCGCGTCGA CGTCGAGCAG GCCACCGGCC GTCTCGCGCT GGCCGAGGCC
AACCTGCTGA CCGAGCTGAC CAACCTGCAC GATGTGAGCG CACGCTACCT GCGCATTGTT
GGCGAGAAGC CGCCGGAGGC CCTGCCAAAG CTGCCCGCCA AGTTTCAGAT CGGCCCCATG
CCCGCCTCCA CCGAAATGTT GATGAAAGAC GGCCTGCCGG GCAGCCCCAC CATCAATGCC
GCGCTGGAGA ACGTGCGCTC CATGAAAACG GCCATCGCCT CACGCCAGGC TGCCTACATG
CCGCGCGTGG ACCTGCGGCT GTATGACTCG CGGGACCGCA ACCTGCAGGG CGTGACCGGC
ACCACCCGCG TCAATGGCAT CGAGCTGGTG CTCAACTACA ACCTGTTTCG CGGCGGCGCC
GACAAGGCGC GCGAGCGCCA GGCGGTCGAT CTGCACGAGC AGGCGCGCGA CCTGAAGGAA
AAGGCCTGCC GCGACGTGCG CCAGACCCTG TCGATCGCCT TCAGTGACGT GAGAACCCTC
AACGAGCAGC TGGCCTACCG CGACCAGCAC CGGCTGTCGA CCGAGAAATC GCGCGAAGCC
TACCTGCAGC AGTTCGAGCT GGGCCAGCGC ACGCTGCTGG ACCTGCTGGA CAGCCAGAAC
GAATACTTCC AGGCCAACCG CTCCTACGTC AACGCCAGCT ACGACCAGAT CATTGCGCAG
GCGCGCACGC TGGCGGGCAT GGGGCAGCTG GTGACGGCGC TCAACGTCAA GCGCGGCGAT
GTGCCCAGCG CCCAGGATGC CGGGCAGGAC CGCACCGGCA TCGACCCGGC CGAGCTGTGC
CCGCAGGATG AGACCGTGGT CGCTACCGTG GACCAGATCA AGGCCCGGTT CGCCGTGGCG
CCCAGGCGTA CCGGCTCCTA TGTCGTGCTG TTGCCCAATC CGGACAATAG CGTGGGCCGT
GTGGTCGTGC AAGGCAACCG CGGAGAGCAG ACGCTTGCCC AGGCCCAGCA GGGCACATTG
CTGGATGGCA GCGTGAAGCC TTTCGAAGTC AGCAAGGTGC AGGTGGAGCG GGATTTCGGC
GCCGCCATCG CCGCCCGCCC ACCGCTACCC GAGTCGTTCA CGCTCTACTT CCAGCGCGGC
AGCACCGAGT TGACTGCCGC ATCGAAGGCC GTGATGTCGC GCATCAAGGA ACTCGCCAAG
GCCCGTAAAG CGTTGGATAT CACGGTGATC GGCCATACCG ACACCATGGG AACGGCTGAA
TCGAACGAAG TCCTGGGGCT CAGGCGAGCG AATGCCATTG CCAAACAAAT GCAGCAGCTC
GGTCTGAGAA ATACCGCGAT CATTGTGGAG TCCAACGGCG AGCGCAATCT TTTCGTGGCT
ACACCTCAAA ATACCAATGA GCCGCGTAAC CGCCGGGCAG AGATAACGGT GCGCTGA
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| Protein sequence | MIKKKQFSLL MLAILAGLGV QAQAQAPAQT LPEPMIDAAR KAVVSNPEVQ ARWHGFQAAG
NERDVARGGY FPQIDLRAGT GRESRETPLT DYGRYNFRGT TLTLNQMLFD GLFTPNEVKR
LGYAKLTRYY ELQEVSETAA LEAVRAYADV VRYRELVDTA TQNYVVHKQT TGQVEERSSA
GVGRRVDVEQ ATGRLALAEA NLLTELTNLH DVSARYLRIV GEKPPEALPK LPAKFQIGPM
PASTEMLMKD GLPGSPTINA ALENVRSMKT AIASRQAAYM PRVDLRLYDS RDRNLQGVTG
TTRVNGIELV LNYNLFRGGA DKARERQAVD LHEQARDLKE KACRDVRQTL SIAFSDVRTL
NEQLAYRDQH RLSTEKSREA YLQQFELGQR TLLDLLDSQN EYFQANRSYV NASYDQIIAQ
ARTLAGMGQL VTALNVKRGD VPSAQDAGQD RTGIDPAELC PQDETVVATV DQIKARFAVA
PRRTGSYVVL LPNPDNSVGR VVVQGNRGEQ TLAQAQQGTL LDGSVKPFEV SKVQVERDFG
AAIAARPPLP ESFTLYFQRG STELTAASKA VMSRIKELAK ARKALDITVI GHTDTMGTAE
SNEVLGLRRA NAIAKQMQQL GLRNTAIIVE SNGERNLFVA TPQNTNEPRN RRAEITVR
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