Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0704 |
Symbol | |
ID | 4011456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 716257 |
End bp | 717267 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637940384 |
Product | ABC transporter related |
Protein accession | YP_547560 |
Protein GI | 91786608 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.433646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAGTA TTTCCCTACA CGGCATCCAC AAACACTTCG GCGACATCGC AGCGCTGACC GACCTGCAGC TGGAGATCGC CGACGGCGAG TTCTTCGTGC TGCTGGGGCC CAGCGGCGCC GGGAAAACCA CGACCCTGCG CATCATCGCC GGGCTGGAGC AACCCGAGAC CGGCCTGGTG CGAATGGACG GCGAAGACGT CACCACTGCA GCGCCGGCCC AGCGCGACTG CGCCTTCGTC TTTCAGCAGT ATTCGCTGTA CCCGCACCTG ACGGTGTTCG ACAACCTGGC GTTTCCGCTG CGCGCACCGC TGCGCCGCAT TCCCGAGGCC GAAATCCGGC GACGGGTGGA GCGGGTTGCC GCCACGCTGC ACATCGAAAG CAAGCTGCAG CGCAAGGCTA CGGCCCTGTC GGGCGGTGAG ATGCAGCGCG TAGCCATCGG CCGCGCCCTG GTGCGCGAAC CACGCGTCTA CCTGATGGAC GAGCCACTGT CTTCGCTGGA CGCGAAGCTG CGCGAGGAAC TGCGCGTGGA ACTCAAGCGC CTGCAACGCC AAAGCGGCAC CACCGTGGTC TACGTCACGC ACGACCAGGT GGAGGCCACG ACGCTGGCCG ACCGTATTGC CATCCTGGAA GCCGGACACA TCCGGCAGAT CGGCACACCC GAGGAGATCT ACGAGGCGCC TGTGTCGGTG CAGGTGGCGC AGCGGCTCGG TTCGCCGGCG ATCAACGTGT TGCCGGCGGG CTGGTTCGCC GGCCAGCATC CGGCAGCGGC GGCCAGCGTC GGCATTCGGC CCGAGGACGT GGAACTGGCA GGTGAGAACG ATGGCTTCGA GTGCACAGTC ATCGAGTCCT CCCTGCTCAA GCATCACGTC ATCGCCGAGC ACGCCGGCGT TGAGGTGCGC GCCCGTCTGA TGCAAAGCGT TGCACCTCCT CCCCAGTCCC GTATCCGCCT GTGTTTTCCG GCTGGCCAGC GCCTGCTGTT CGACCAGGCC GGAAAGCGGC TTGCAGCCTG A
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Protein sequence | MASISLHGIH KHFGDIAALT DLQLEIADGE FFVLLGPSGA GKTTTLRIIA GLEQPETGLV RMDGEDVTTA APAQRDCAFV FQQYSLYPHL TVFDNLAFPL RAPLRRIPEA EIRRRVERVA ATLHIESKLQ RKATALSGGE MQRVAIGRAL VREPRVYLMD EPLSSLDAKL REELRVELKR LQRQSGTTVV YVTHDQVEAT TLADRIAILE AGHIRQIGTP EEIYEAPVSV QVAQRLGSPA INVLPAGWFA GQHPAAAASV GIRPEDVELA GENDGFECTV IESSLLKHHV IAEHAGVEVR ARLMQSVAPP PQSRIRLCFP AGQRLLFDQA GKRLAA
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