Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0661 |
Symbol | |
ID | 4011121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 672521 |
End bp | 673819 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637940342 |
Product | D-serine deaminase |
Protein accession | YP_547518 |
Protein GI | 91786566 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACAC TGCAAGACAT TCTCGATCCG CAGATCGACC GCTCCTTCAA GGGATTTCCG CACACCAGCC CTGCGCTGCG CCGTTCGCAG ATTGCCGCCC AGCACTGGCG CGTGCTCGAC GGCGACCTGC CGCTGCCCGT GGCGCTGGTC AAGCAGCAGG CCCTGCAGCA CAACCTGTCC TGGATGCAGC GCTTCGCCAC CGACCGGGGC ATCGACATGG CGCCGCATGG CAAGACCACC ATGTCGCCGC AACTGCTCAA GCGCCAGCTC GATGCGGGCG CCTGGGGCCT GACCTTTGCC ACCGTCGCCC AGTTGCGTGC CGGCGTCTTG GCGGGCGCGC GCCGCTGCAT GATTGCCAAC CAGGTCTTCA CCGCGGCAGA CCTCGCCGGC ATTCAGGACA TGCAGCGCGA GTACGCAGGC TTGCGCATTG CCTTTCTGGT GGATTCGGCG GCACAGCTGG AGCTTATTGA GGCCTGGCAT GCGTCGCAAC AGGATGCGCA AACGCCGGTG CGGCCTTTTG AGGTGCTGCT GGAAATCGGT GTCGAGGGCG GCCGCACCGG CTGCCGCAAC CAGCACGATG CCCTGACGCT GGCCCAACGC GTTCATGCCA GCCCGGCTTG CCGCCTGGTC GGCATCGAGT GTTACGAAGG CCTGGGCGCG ACCGGTCAGT CCGACCCGGA CGAGGCCTAT GCGGGGGCGC TGATGCAGCG CGTGTGCGAC ATCGCCATTG CCTGCGACCA GCAGCATTTT TTTGACAATG AGGAAGTGCT GGTCTCGGCC GGCGGTTCGG CGATTTTTGA CCTGGTGGCC AACCGCCTCA AACCCGAACT CTCGCAACCT GTGCGCGGCC TGTTGCGCTC GGGCTGCTAC GTCACGCATG ACCACGGTTT TTACAAACGC ATGGTGAGCA CGGTCAATTC ACGCCTCGGC TGCGGCGATG GCCTGCAGGC CGCGCTGGAA GTCTGGGCGG CGGTGCAGTC CTGCCCCGAG CCGGGTCTGG CGATTCTTGC GGTCGGCAAG CGCGACATTT CCTACGATCT GGATTTGCCC GTGCCGCTGG GCTTTTGCAA ACCCGGCGAC CGCGGCGTTA CCGGTGCACC CGCCGACTGG AAGATCGGCG GCCTGAACGA CCAGCATGCC TACTTGCGCG GCACCGGCCC CGAGCATGCG GCGCTCAAGG TGGGCGACCT GGTGGCGCTG GGCATTTCGC ACCCCTGCAC CACGTTTGAC AAATGGCGCT GGATGCCCGT GGTGGATGAG AACTACACCG TGTGCGATGC CCTCGTAACC TGTTTCTGA
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Protein sequence | MTTLQDILDP QIDRSFKGFP HTSPALRRSQ IAAQHWRVLD GDLPLPVALV KQQALQHNLS WMQRFATDRG IDMAPHGKTT MSPQLLKRQL DAGAWGLTFA TVAQLRAGVL AGARRCMIAN QVFTAADLAG IQDMQREYAG LRIAFLVDSA AQLELIEAWH ASQQDAQTPV RPFEVLLEIG VEGGRTGCRN QHDALTLAQR VHASPACRLV GIECYEGLGA TGQSDPDEAY AGALMQRVCD IAIACDQQHF FDNEEVLVSA GGSAIFDLVA NRLKPELSQP VRGLLRSGCY VTHDHGFYKR MVSTVNSRLG CGDGLQAALE VWAAVQSCPE PGLAILAVGK RDISYDLDLP VPLGFCKPGD RGVTGAPADW KIGGLNDQHA YLRGTGPEHA ALKVGDLVAL GISHPCTTFD KWRWMPVVDE NYTVCDALVT CF
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