| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0601 |
|---|
| Symbol | |
|---|
| ID | 4011236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 607262 |
|---|
| End bp | 608338 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637940283 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_547459 |
|---|
| Protein GI | 91786507 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.828078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTACA GAGAAAACGG CCAATTCAAG ACAACGTATC GGGCAGACCA GCAGATCTTC
CCGATCGCAC AGGACAGGCT GGTGGTAGCC CTGTTTCTGC TGTTTGCCTT TATCGCCGTA
CCCATGCTGG CCAGCGACTA TCTGTTTCGC GCCATCCTGA TTCCCTTTTT GATCATCTCG
CTGGCCGCGC TGGGCGTGAA CATCCTGGTG GGCTATTGCG GCCAGATCTC GCTGGGCTCG
GGTGCCTTCA TGGCGGTAGG GGCTTACGGC GCCTACAACT TCTTTGTGCG CCTGCCCGGC
CTGCCGCTGA TCCCGGCCCT GATTCTGGGC GGACTGTGTG CCACCTTCTT CGGCATCCTG
TTCGGCCTGC CCAGCCTGCG GGTCAAGGGT CTGTACCTGG CCGTGGCAAC GCTGGCCGCG
CAGTTCTTCG CCGACTGGAT GTTCCTGCGC ATCAAGTGGT TCACGCTGGA CTCCCCTTCT
GGCTCCGTCT CGGTGTCCAA CCTGCAGGTG TTCGGGTTTC CGATCGAGAG CGCGCACAGC
AAATACTGGC TCTGCCTGTC CATCCTGGTG GTGATGGCGC TGCTGGCCAA AAACCTGGTG
CGCGGCGCCA TTGGCCGGGA ATGGATGGCG ATTCGCGACA TGGACGTGGC CGCTGCCGTG
ATCGGCATCC GGCCCATGTA CGCCAAGCTC AGCGCCTTTG CGGTCAGCTC GTTCATCGTC
GGCATGTCGG GCGCGCTCTG GGGCTTTGTT TACCTCGGCG CATGGGAGCC GGCGGCATTC
TCGGTGGACC AGTCATTCCG GCTGCTGTTC ATGGTGATCA TTGGCGGCAT GGGCTCCATC
CTGGGGGGCT TTCTGGGTGC GGCCTTCATC ACCGTCTTGC CGATCGCGCT GAATCAGTTC
CTGCCGGTAC TCGCACAGCT GCTTGGATTT GAAATCTCAA CCGCAGGCAT TTCCCATGCC
GAGCTGATGA TTTTTGGCGG CCTGATTGTC TGGTTCCTGA TCGTGGAGCC GCACGGCCTG
GCCAAGCTCT GGTCGATCGG CAAACAGAAG TTGCGGCTCT GGCCGTTTCC TCATTAG
|
|---|
| Protein sequence | MLYRENGQFK TTYRADQQIF PIAQDRLVVA LFLLFAFIAV PMLASDYLFR AILIPFLIIS
LAALGVNILV GYCGQISLGS GAFMAVGAYG AYNFFVRLPG LPLIPALILG GLCATFFGIL
FGLPSLRVKG LYLAVATLAA QFFADWMFLR IKWFTLDSPS GSVSVSNLQV FGFPIESAHS
KYWLCLSILV VMALLAKNLV RGAIGREWMA IRDMDVAAAV IGIRPMYAKL SAFAVSSFIV
GMSGALWGFV YLGAWEPAAF SVDQSFRLLF MVIIGGMGSI LGGFLGAAFI TVLPIALNQF
LPVLAQLLGF EISTAGISHA ELMIFGGLIV WFLIVEPHGL AKLWSIGKQK LRLWPFPH
|
|---|
| |