Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0582 |
Symbol | |
ID | 4011334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 586183 |
End bp | 587373 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637940264 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_547440 |
Protein GI | 91786488 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.391359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAC CGCTTGACGG CATCACTGTC GTTTCCCTCG AACACGCGAT CGCCGCGCCG TTCTGCACCC GCCAGCTGGC CGACCTCGGC GCCCGCGTGA TCAAGATCGA GCGCCCCGGC GTGGGCGACT TTGCGCGCGC CTACGACCAG CGCGTGCGCG GCCAGGCCTC GCACTTTGTT TGGACCAACC GCTCCAAGGA AAGCCTCACA CTCGACCTGA AGCAGCCCGC GGCGCTGGCC GTGCTGAAGG CATTGCTGGC CAAGGCCGAC GTGCTGGTGC AAAACCTCGC GCCCGGCGCC ACCGCGCGCA TGGGGCTGGG CTATGAAGCG CTCCGCCAGG ACCATCCCGG CCTGATCGTC TGCGACATCT CGGGCTACGG CGAAGACGGC CCCTACCGCG ACAAGAAGGC CTACGACCTG CTGATCCAGA GCGAGGCCGG CCTGCTGTCG ATCACCGGCA CGGCCGAAGA GCCCTCCAAG GCCGGCAACT CGATGGCCGA CATCGCCGCC GGCATGTACG CCTACACCAG CGTGCTGGCG GCGCTGCTGC TGCGCGATAA ACGGGGTGGG ACCGGCAAAG GCTCGCACAT CGACGTGTCC ATGCTCGAAT CGCTGGCCGA ATGGATGGGT TACCCGCTGT ATTACGCATT TGAAGGCGCC CCGCCGCCGC CGCGCACCGC CGCCTCGCAT GCCAGCATCT ACCCCTATGG CCCGTTCCAG GCCGGTGACG GCGGCACGGT GATGCTGGGC CTGCAAAACG AACGCGAATG GAAAGTCTTT TGCGAGGTCG TGCTGCGAAA TGCCCCCCTG GCCACCGACC CGCGCTTTGA CAGCAACGCC CGTCGCAACG AAAACCGCGA TGCGCTCAAG GCCATCATCC TGGCCACCTT TGCCCAGCTC GGCACCGCCC AGGTCGTGGC ACGGCTGGAC GAAGCGCAGA TTGCCAATGC CCGCATGAAC AGCATGGCCG AGGTCTGGGC GCACCCGCAG CTCAAGGCGC GCGAGCGCTG GCAAAACGTG GGTTCACCGG CGGGTGACAT TCCGGCGCTG CTGCCGCCGG GCCGCAACAG CAGCTTTGAC TACCGCATGG ACGCCATCCC CGCCGTCGGC CAGCACACCG ACACCATCCT GCGCGAGCTG GGTCGTGACG AGGCCGCCAT CGCCCAACTG TACGCGGCCC AGGCCGTTTA A
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Protein sequence | MTRPLDGITV VSLEHAIAAP FCTRQLADLG ARVIKIERPG VGDFARAYDQ RVRGQASHFV WTNRSKESLT LDLKQPAALA VLKALLAKAD VLVQNLAPGA TARMGLGYEA LRQDHPGLIV CDISGYGEDG PYRDKKAYDL LIQSEAGLLS ITGTAEEPSK AGNSMADIAA GMYAYTSVLA ALLLRDKRGG TGKGSHIDVS MLESLAEWMG YPLYYAFEGA PPPPRTAASH ASIYPYGPFQ AGDGGTVMLG LQNEREWKVF CEVVLRNAPL ATDPRFDSNA RRNENRDALK AIILATFAQL GTAQVVARLD EAQIANARMN SMAEVWAHPQ LKARERWQNV GSPAGDIPAL LPPGRNSSFD YRMDAIPAVG QHTDTILREL GRDEAAIAQL YAAQAV
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