| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0564 |
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| Symbol | |
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| ID | 4010987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 566276 |
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| End bp | 567538 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637940246 |
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| Product | branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | YP_547422 |
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| Protein GI | 91786470 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAG ACGATCGCGA TACACCTTCC CTCATCAACC GCCGCCGCCT GGTGCAGGGC
ATGGCGGCCG CGCTGCCGCT GACAGGCCTG CCCCTGTGGG CGCAGGCTCA GCAGTTCCCT
ACGGCCAAGG TGAATACGAC GAAGCTGGCC ATCACTGACA CGGAAGTCAC GGTGGGGCAG
CTGCATTCGT CCTCCGGCAC CATGGCGATT TCGGAGACGG GATCCATCCA GGCCGAGCAG
CTTGCGATTG ACCAGATCAA TGCCATGGGC GGTGTGCTGG GCCGAAAGAT CAAGGTGATC
AAGGAAGACG GCGCGTCTGA CTGGCCCACG TTTGCCGAGA AGTCCAAGAA GCTGCTGGTG
AACGACAAGG TCGCCGCCGT CTTCGGCTGC TGGACATCGG CCTCCCGCAA GGCTGTGCTG
CCGATCTTCG AGAAGGAAAA CGGCATGCTG TACTACCCGA CGTTCTACGA AGGCCTGGAG
CAGAGCAAGA ACGTGATCTA CACCGGCCAG GAGGCCACGC AGCAGATTCT TTACGGCCTG
GACTGGGCGG CCAAGGAGAA AAAGGCCAAG ACCTTTTTCC TCGTCGGCTC CGACTACATC
TGGCCGCGCA CCTCGATGAA GATCGGGCGC AAGCACATCG AGGGGCATCT CGCCGGCAGC
AAGGTGGTGG GCGAGGAGTA CTACCCGCTG GGCCACACCA ACTTCAACTC GCTGATCAAC
AAGATCAAGG TGGCCAAGCC CGACTGCATC TTCATCGCCG TGGTCGGTGG CTCCAACGTG
GCGTTCTACA AGCAGCTCAA GGCCGCCGGC GTCACCGCCG ACAAGCAGTT CCTGCTGACT
ATCTCGGTGA CTGAAGATGA AGTGCTGGGC ATCGGCGGCG AGAACATGAA CGGCTTTTAC
GCCTCGATGA AGTACTTCCA GTCGCTGGAC AACGCCAACA ACAAGGCCTT TGTGTCGGCC
TTCAAGGCCA AGTACGGCAA GGACGCGGTG ATCGGCGACG TGACGCAGGC CGGCTACCTG
GGCCCCTGGC TGTGGAAGGC CACGGTCGAG AAGGCCGGCA GCTTCGATGT GGACAAGATC
GCCGCCGCGT CCACGGGCAT TGAGCTCAAG ACCGCGCCCG AAGGCTACGT GAAGCTGCAC
GACAACCACC ACCTGTGGAG CAAGGCACGC ATCGGCCAGG CGCAGACCGA CGGGCAGTTC
AAGGTGGTGG CCGAGTCTTC GGCACTGATC GAGCCCAACC CCTTCCCCAA GGGCTATCAG
TAA
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| Protein sequence | MSKDDRDTPS LINRRRLVQG MAAALPLTGL PLWAQAQQFP TAKVNTTKLA ITDTEVTVGQ
LHSSSGTMAI SETGSIQAEQ LAIDQINAMG GVLGRKIKVI KEDGASDWPT FAEKSKKLLV
NDKVAAVFGC WTSASRKAVL PIFEKENGML YYPTFYEGLE QSKNVIYTGQ EATQQILYGL
DWAAKEKKAK TFFLVGSDYI WPRTSMKIGR KHIEGHLAGS KVVGEEYYPL GHTNFNSLIN
KIKVAKPDCI FIAVVGGSNV AFYKQLKAAG VTADKQFLLT ISVTEDEVLG IGGENMNGFY
ASMKYFQSLD NANNKAFVSA FKAKYGKDAV IGDVTQAGYL GPWLWKATVE KAGSFDVDKI
AAASTGIELK TAPEGYVKLH DNHHLWSKAR IGQAQTDGQF KVVAESSALI EPNPFPKGYQ
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