Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0554 |
Symbol | |
ID | 4011286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 553244 |
End bp | 553774 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637940236 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_547412 |
Protein GI | 91786460 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.29193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACGG AAACAATCGC GCTTGAACCG GTCGTGCCCG CAGGCTGGGC CGGGCGCGCA CTCGACGGGC TGAACCGGCT CATCACCGGC GTGCTGCTCG CCACGGTAGC GGTGATGGTG AGCGTCGTGT CGGCGCAGGT TGCGCTGCGC TATGGCTTGA ATCGCTCGAT CGACTGGGCC GACGAGATCG GACGCCTGGC TTTCGTCTGG TCCATCTTTC TGGCGATCCC GCTGGGGGTG CGCCAGGGCG CGCATATTGG CATCGACATC ATGGTCGACA AGTTGCCAGC CCGCTGGCGC GGCGCGCTCA AGCGGGCCGG CGCGGCCCTG TGCGCCGCCA TGATGTTTGC GATTGCCTGG GCGGCCTTCC GTGTGGCGCG CGAGCAATGG GATGAACTGA TGGCGACGGT GGACTGGAGT GTCGGCTGGT TCATTGTGCC GGTGGGCCTG GGCGCGCTGC TGAGCGCGCT GCACCTGGTG CGCATCGTCA TCGCGGGTGC GCCTGTGCAG GCGCTGGGGA GTGCCGAATG A
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Protein sequence | MTTETIALEP VVPAGWAGRA LDGLNRLITG VLLATVAVMV SVVSAQVALR YGLNRSIDWA DEIGRLAFVW SIFLAIPLGV RQGAHIGIDI MVDKLPARWR GALKRAGAAL CAAMMFAIAW AAFRVAREQW DELMATVDWS VGWFIVPVGL GALLSALHLV RIVIAGAPVQ ALGSAE
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