Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0550 |
Symbol | |
ID | 4011282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 548947 |
End bp | 549672 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637940232 |
Product | Asp/Glu racemase |
Protein accession | YP_547408 |
Protein GI | 91786456 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3473] Maleate cis-trans isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGC CAGTGCGCCT CGGCGTATTG ACCCCCTCTT CCAATACCGC CCTGGAGCCG CTGACCAGCG CCATTGCGGT TGAAATTCCA GGTGTTAGCG CACACTTCTC ACGCTTCAGG GTGACCGAAA TCTCACTGGA CGCACAGGCG CTGGGCCAGT TTGACGACAG CAAAATCCTG GCGGCGGCCG AGCTGCTGGC CGACGCAAAG GTCGATGTGA TTGGCTGGAG CGGCACATCC TCGGGCTGGT TGGGCTTCGA TGCCGACCAC CGCCTGTGTG AGCGCATCCG TGAGCGCACG GGCATCCCCG CCACCACGGC TGTGCTGGCG CTCAATGAAC TGCTGGCCTT GCAGGGCGTG CGCAAGCTGG CGCTGGTGAC GCCCTACACC GCGGATGTGC AGCAGCGCAT CATGGCCAAT TACCGCGCGC TCGGCATCGA AGTGGTGGCG GAGCGCCATC TGGGGATCCG CGTCAACCAT GACTTCGCCG GGGTCGAGCC GTCGAGGCTG CTGGCGCTGA TGCGCGAGGT TGCGGCGGAG GGCCCGCAGG CCATCACCAC CTTCTGCACC AACCTGCGCG CCGCACCGAT GGCGCAGCAG GTAGAAGAAG AACTGGGCAT CCCGCTGCTG GACACCGTGA GCACCACCGT CTGGGGCATG CTGCGCGCTG CCGGCGTTCC ATCAGCCAAC ATCACCGGGT GGGGGAGGCT TTTCCAATGC TCGTGA
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Protein sequence | MTQPVRLGVL TPSSNTALEP LTSAIAVEIP GVSAHFSRFR VTEISLDAQA LGQFDDSKIL AAAELLADAK VDVIGWSGTS SGWLGFDADH RLCERIRERT GIPATTAVLA LNELLALQGV RKLALVTPYT ADVQQRIMAN YRALGIEVVA ERHLGIRVNH DFAGVEPSRL LALMREVAAE GPQAITTFCT NLRAAPMAQQ VEEELGIPLL DTVSTTVWGM LRAAGVPSAN ITGWGRLFQC S
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