Gene Bpro_0544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0544 
Symbol 
ID4011276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp541905 
End bp543368 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content64% 
IMG OID637940226 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_547402 
Protein GI91786450 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCA GAGGCACCCT CTCGCAACGT CTATCCGTAG TGTTTTCGGT CCTGCTGCTG 
GCTTGCTGCA GTGCATCGGC GTGGCTACAG ATAAAGGCAA ATGGGCGCCA TGATCAGGAA
GTGACCCAGC GCCTCTCCAA CGGCCTTGCA GCACACATCG CAGACAACGC TGCGCTCGTG
GAACGCGACG GACTCAACCC GGAGGCCGTG CACGATCTGT TCGACAAACT GATGGCGGTC
AATCCTAGCG TTGAGGTCTA CTTGTTGGAT CTGGACGGTC GCATTCAGGC TCAGGCCGCA
CCGCCTGGGC ACTTGAAGCG TGACCGGGTC GACGTCGCGC CCATCCGACG CCTTCTCGAA
GGCACACCCT TGCCGATCGT CGGCGACGAT CCGCGAGGTG ATGGCGTGCA GAAAGTGTTC
AGTGCGGCAC CCTTGCGCGT CGATGACCGC GATGTCGGCT ATGTCTACGT CGTGTTGTTC
GGCGAGGACC GTGATGCGGT GGCTGCCAAC GTCGCGGCGA ACAGTGTACT CAGGACCACC
CTGTGGTCGA TGGCTCTCGT GGCGCTGCTA GGCCTGCTGG CCGGACTGGC GGCCTTTCAC
CTGATCACCC GGCCGCTGCG CGATCTCACC GGTGCGGTGC GCAAATTCGA GAAAGACGGC
GTGGTGTCGC TGCACGAGGC GGGGCCGGCC CTCGAACGGG CGGGCCGGGG CAGCGACGAA
ATCGCCACAC TGGGACAGGC CTTTGCGCAG ATGACACAGC GCATCGCGGC GCAGTGGCGC
GAACTCACGG CGCAGGACCA GCAGCGGCGC GAACTGTTTG CCAACATTTC GCACGACCTG
CGCACACCGC TCACCTCTCT GCACGGTTAC CTCGAAACGC TGCTCATCAA GGCCGACGCC
CTGGACCCCG GCGAACGCCG CCGCTACCTC GAGATCGCGT TGGCGCAAAG CCGTAAGGTC
GCGCGGCTGG CGCAGGAATT GTTCGAGCTG GCGCGTCTGG AGTACGGCGT CGTCAAGCCC
GACAAGGAGA CTTTCGCCCT GGCCGACCTG GTGCAGGACG TGTTCCAGAA GTTCGAATTG
GCGGCAGAGG CGCGGCACCA ACGTCTGGTG CCGGACATTG CACCAGGCCT TCCCGTCGTT
ACAGCCGATC TCGGCATGAT CGAGCGCGTG CTGACCAACC TGCTGGACAA CGCGATCCGC
CACACGCCCG AGGGCGGCGA GATCGTGGTG CAGCTACGAC AAGACCGGGA GTCCGTGTGC
GTCGAGGTCA GCGACACCGG ACCGGGCATT CCCGGCGAGT TACAGAAGTC GCTCTTCACC
CGACCCGCGT TTTCGTCGGC CGGCGGCCGC AGCGGCGGAC TCGGACTGGT CATTGTGCAA
CGCATACTTC AGTTGCATGG CAGCGACATT CGGCTGCTGC AGCGTGCCGA GAAAGGTGCC
GTATTTTTCT TTCAACTCAC ATGA
 
Protein sequence
MSFRGTLSQR LSVVFSVLLL ACCSASAWLQ IKANGRHDQE VTQRLSNGLA AHIADNAALV 
ERDGLNPEAV HDLFDKLMAV NPSVEVYLLD LDGRIQAQAA PPGHLKRDRV DVAPIRRLLE
GTPLPIVGDD PRGDGVQKVF SAAPLRVDDR DVGYVYVVLF GEDRDAVAAN VAANSVLRTT
LWSMALVALL GLLAGLAAFH LITRPLRDLT GAVRKFEKDG VVSLHEAGPA LERAGRGSDE
IATLGQAFAQ MTQRIAAQWR ELTAQDQQRR ELFANISHDL RTPLTSLHGY LETLLIKADA
LDPGERRRYL EIALAQSRKV ARLAQELFEL ARLEYGVVKP DKETFALADL VQDVFQKFEL
AAEARHQRLV PDIAPGLPVV TADLGMIERV LTNLLDNAIR HTPEGGEIVV QLRQDRESVC
VEVSDTGPGI PGELQKSLFT RPAFSSAGGR SGGLGLVIVQ RILQLHGSDI RLLQRAEKGA
VFFFQLT