Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0544 |
Symbol | |
ID | 4011276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 541905 |
End bp | 543368 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637940226 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_547402 |
Protein GI | 91786450 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTCA GAGGCACCCT CTCGCAACGT CTATCCGTAG TGTTTTCGGT CCTGCTGCTG GCTTGCTGCA GTGCATCGGC GTGGCTACAG ATAAAGGCAA ATGGGCGCCA TGATCAGGAA GTGACCCAGC GCCTCTCCAA CGGCCTTGCA GCACACATCG CAGACAACGC TGCGCTCGTG GAACGCGACG GACTCAACCC GGAGGCCGTG CACGATCTGT TCGACAAACT GATGGCGGTC AATCCTAGCG TTGAGGTCTA CTTGTTGGAT CTGGACGGTC GCATTCAGGC TCAGGCCGCA CCGCCTGGGC ACTTGAAGCG TGACCGGGTC GACGTCGCGC CCATCCGACG CCTTCTCGAA GGCACACCCT TGCCGATCGT CGGCGACGAT CCGCGAGGTG ATGGCGTGCA GAAAGTGTTC AGTGCGGCAC CCTTGCGCGT CGATGACCGC GATGTCGGCT ATGTCTACGT CGTGTTGTTC GGCGAGGACC GTGATGCGGT GGCTGCCAAC GTCGCGGCGA ACAGTGTACT CAGGACCACC CTGTGGTCGA TGGCTCTCGT GGCGCTGCTA GGCCTGCTGG CCGGACTGGC GGCCTTTCAC CTGATCACCC GGCCGCTGCG CGATCTCACC GGTGCGGTGC GCAAATTCGA GAAAGACGGC GTGGTGTCGC TGCACGAGGC GGGGCCGGCC CTCGAACGGG CGGGCCGGGG CAGCGACGAA ATCGCCACAC TGGGACAGGC CTTTGCGCAG ATGACACAGC GCATCGCGGC GCAGTGGCGC GAACTCACGG CGCAGGACCA GCAGCGGCGC GAACTGTTTG CCAACATTTC GCACGACCTG CGCACACCGC TCACCTCTCT GCACGGTTAC CTCGAAACGC TGCTCATCAA GGCCGACGCC CTGGACCCCG GCGAACGCCG CCGCTACCTC GAGATCGCGT TGGCGCAAAG CCGTAAGGTC GCGCGGCTGG CGCAGGAATT GTTCGAGCTG GCGCGTCTGG AGTACGGCGT CGTCAAGCCC GACAAGGAGA CTTTCGCCCT GGCCGACCTG GTGCAGGACG TGTTCCAGAA GTTCGAATTG GCGGCAGAGG CGCGGCACCA ACGTCTGGTG CCGGACATTG CACCAGGCCT TCCCGTCGTT ACAGCCGATC TCGGCATGAT CGAGCGCGTG CTGACCAACC TGCTGGACAA CGCGATCCGC CACACGCCCG AGGGCGGCGA GATCGTGGTG CAGCTACGAC AAGACCGGGA GTCCGTGTGC GTCGAGGTCA GCGACACCGG ACCGGGCATT CCCGGCGAGT TACAGAAGTC GCTCTTCACC CGACCCGCGT TTTCGTCGGC CGGCGGCCGC AGCGGCGGAC TCGGACTGGT CATTGTGCAA CGCATACTTC AGTTGCATGG CAGCGACATT CGGCTGCTGC AGCGTGCCGA GAAAGGTGCC GTATTTTTCT TTCAACTCAC ATGA
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Protein sequence | MSFRGTLSQR LSVVFSVLLL ACCSASAWLQ IKANGRHDQE VTQRLSNGLA AHIADNAALV ERDGLNPEAV HDLFDKLMAV NPSVEVYLLD LDGRIQAQAA PPGHLKRDRV DVAPIRRLLE GTPLPIVGDD PRGDGVQKVF SAAPLRVDDR DVGYVYVVLF GEDRDAVAAN VAANSVLRTT LWSMALVALL GLLAGLAAFH LITRPLRDLT GAVRKFEKDG VVSLHEAGPA LERAGRGSDE IATLGQAFAQ MTQRIAAQWR ELTAQDQQRR ELFANISHDL RTPLTSLHGY LETLLIKADA LDPGERRRYL EIALAQSRKV ARLAQELFEL ARLEYGVVKP DKETFALADL VQDVFQKFEL AAEARHQRLV PDIAPGLPVV TADLGMIERV LTNLLDNAIR HTPEGGEIVV QLRQDRESVC VEVSDTGPGI PGELQKSLFT RPAFSSAGGR SGGLGLVIVQ RILQLHGSDI RLLQRAEKGA VFFFQLT
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