| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0433 |
|---|
| Symbol | |
|---|
| ID | 4011534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 448530 |
|---|
| End bp | 450032 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637940118 |
|---|
| Product | FAD linked oxidase-like |
|---|
| Protein accession | YP_547295 |
|---|
| Protein GI | 91786343 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00114577 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCC CCTTATCTCC CCCGCAGCAC GATTTACATG AAAGAGCCGA GCGCCAGTCG
CACGTGGTGC AGGCGCTTCA AGCCGTGCTG CCCGCCCACG CCCTGCTCTG GAACAGCGAA
GACACCACAC CCTATGAATG TGACGGTCTG ACGGCTTATC GCCAGCGCCC GCTGGTGGTG
GCCCTGCCCG AAACCTATGC GCAGGTGCAG GCCGTGCTGC AAACCTGCCA CAGCCTTGAG
GTGCCGGTGG TGGCGCGCGG CGCCGGCACC GGCCTTTCCG GCGGCGCGAT GCCGCACCGG
CTGGGTGTCA CGCTGTCGCT GGCCAAGTTC AACAAAATCC TGAAGCTCGA CCCCACCAGC
CGCACCGCCG TCGTGCAGGG CGGTGTGCGC AACCTGGCGA TCTCCGAAGC GGCAGCGCCC
TGCGGCCTCT ATTACGCACC CGACCCGTCA AGCCAGATTG CCTGCACCAT CGGCGGCAAC
GTGGCCGAGA ATTCCGGCGG CGTGCACTGC CTCAAGTACG GGCTCACCGT GCACAACGTG
CTCAAGGTCA AGGGCTTCAC CATCACCGGG GAAGAAGTCG AATTTGGCAG TGACGCGCTG
GATGCGTCGG GCTACGACCT GCTGAGCATC ATCATCGGCA GCGAAGGCAT GCTGGCCGTG
ACGACCGAGG TCACCGTCAA GCTTGTGCCC AAACCGCAGC TGGCGCGCTG CATCATGGCC
AGCTTTGACG ATCTGCGCAA AGCCGGTGAT GCGGTGGCGG CGGTCATTGC GGCCGGCATC
ATCCCGGCGG GGCTGGAGAT GATGGACAAG CCCATGACGG CTGCCGTGGA AGATTTTGTG
CATGCGGGCT ACGACCTGAG CGCCGAAGCG ATTTTGCTGT GCGAGAGCGA TGGCACACCC
GAGGAAGTCG AGGAAGAGAT CGGCCGCATG AGCGAGGTGC TGCGCCGCTG CGGCGCCACC
GCCATTGCCG TGAGCCAGAA TGAGGCCGAG CGCCTGCGCT TCTGGAGCGG ACGCAAGAAT
GCCTTCCCCG CGTCCGGCCG CATCAGCCCC GACTACATGT GCATGGACTC CACCATTCCG
CGCAAGCGTC TGGCCGACAT CCTGCTCGCG ATCCAGGACA TGGAAAAGAA ATACCAGCTG
CGTTGCGCCA ATGTGTTTCA TGCCGGCGAC GGCAACCTGC ACCCGCTGAT TTTGTTTGAC
GCCAACGACG CCGACCAGTT GCACCGCTGC GAGTTGTTCG GGGCCGACAT TCTTGAAACC
AGCGTCGCCA TGGGCGGCAC CATCACCGGC GAGCACGGCG TTGGCGTGGA GAAACTCAAC
TCCATGTGCG TGCAATTTTC CGCGGAAGAA AACGAGCAGA TGTTTGGCGT CAAGCGTGCC
TTCGATGCCA GGGGCCTGCT CAACCCCGGC AAGGTCATCC CCACGCTGAA CCGCTGCGCC
GAGTACGGAA AAATGCTGGT GCGTGGCGGC CAGATCGCGC ATCCGGACCT GCCGCGTTTC
TGA
|
|---|
| Protein sequence | MNAPLSPPQH DLHERAERQS HVVQALQAVL PAHALLWNSE DTTPYECDGL TAYRQRPLVV
ALPETYAQVQ AVLQTCHSLE VPVVARGAGT GLSGGAMPHR LGVTLSLAKF NKILKLDPTS
RTAVVQGGVR NLAISEAAAP CGLYYAPDPS SQIACTIGGN VAENSGGVHC LKYGLTVHNV
LKVKGFTITG EEVEFGSDAL DASGYDLLSI IIGSEGMLAV TTEVTVKLVP KPQLARCIMA
SFDDLRKAGD AVAAVIAAGI IPAGLEMMDK PMTAAVEDFV HAGYDLSAEA ILLCESDGTP
EEVEEEIGRM SEVLRRCGAT AIAVSQNEAE RLRFWSGRKN AFPASGRISP DYMCMDSTIP
RKRLADILLA IQDMEKKYQL RCANVFHAGD GNLHPLILFD ANDADQLHRC ELFGADILET
SVAMGGTITG EHGVGVEKLN SMCVQFSAEE NEQMFGVKRA FDARGLLNPG KVIPTLNRCA
EYGKMLVRGG QIAHPDLPRF
|
|---|
| |