| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0423 |
|---|
| Symbol | |
|---|
| ID | 4011524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 436572 |
|---|
| End bp | 438236 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637940108 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_547285 |
|---|
| Protein GI | 91786333 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA CCGTGACGCC GATGAAGCCG GTGCAACCCG TGCTCGACAT CGTCGACCTG
AGCATCTGCC TGCCCAAGGG TGCCGACCGC GCGCTGGCCG TCGAAGGCGC CACACTCTCC
GTGCTGCCGG GCCAGACGCT GTGCGTCGTC GGCGAGTCGG GCTCGGGCAA ATCGATGATC
GCCAACGCGG TCATGGGCCT GCTGCCACGC CCGCAGGTGG CGCCGGTGGC CGGCAAGATC
CTGTTCGAGG GCGTCGACCT GCTGTCACTC ACCGAAGCAC AGATGCGCGA GCTGCGCGGA
CGCCGCATCG GCATGGTGTT CCAGGAGCCG ATGACGGCAC TCAACCCGGT CATGCGCATC
GGCGAGCAGA TTGGCGAGGT GTTCGACGCG CACGGCTCGG TGCCGGCCGC CGAGAAGCGG
CGCCGCATTC TTGCCGCGCT GGCCGATGTC GGTTTGCCCG ACCCCGAGCT GTTGATCGAC
AGCTACCCGT TCCGCCTCTC CGGCGGCCAG CGCCAGCGCG TGATGATCGC CTGCGCCCTG
GTACTGGAGC CGGTGCTGCT GATCGCCGAC GAGCCGACCA CCGCGCTCGA CGTGACGACG
CAGGCACAGA TTCTCAAGCT GGTGCGCGAG CTGCAGCAGC GCCGCGGCAC GGCCGTGCTC
TTTATCACGC ACGACTTCGG CGTGGTCTCG GAAATCGCCG ACCATGTGGT GGTGATGCAG
ACCGGCAAGG TCGTCGAGGC TGGGCCTGCG AGCGCAGTGC TCCGCGCGCC ACAGCATCCC
TACACGCGCA AGCTGATCGC CGCCATTCCC CACGGCCAGG CGCAACGCGC CACACCCACC
GACGATGTGG TGCGGGTGCT GCAGGTGCAG GACCTGTGCA AGATCTACAA GTCGGGCAAC
GGCCTCTTCA AACGCGCCCG CTCGGTGCAG GCCGCGAAGG ACGTCAACTT CGAGCTGCAC
CGCGGCCAGA CGCTGGGACT GGTGGGCGAG TCGGGCTCGG GCAAGTCTAG CGTGGGCCGC
TGCCTGGTCG GCCTGGCGCC TTTCGACAGC GGGCGCATCC TCTTCAAGGG CCGCAACCTG
TCGCAGGGTG AAGCCTTCCG GCGCGAAGCC GCGGGCAGGA TCCAGATGGT GTTTCAGGAT
CCGTATGCGT CGCTGAACCC GCGCCACCGC GTGGGTGCGG CCATCGCCGG CGGCCCGATC
GCTCAGGGCG TGAGCAAGAC CGAAGCCATG GCACGCGCGA TGGAACTGCT GAACCTGGTC
GGCCTCGGTG CCGATGCGGC GCAGCGCTAT CCGCACGAGT TCTCGGGTGG TCAGCGGCAG
CGCATCGGCA TCGCCCGCGC GCTGGCCATG CAACCCGAAC TGCTGGTAGC TGACGAGCCG
GTGTCGGCGC TCGACGTGTC GGTGCAGGCA CAGGTGCTGG AGTTGTTCGC CCAGGTGCGC
GAGCAGTTCC AGCTGGCCAT GGTGTTCATC ACGCACGACC TGCGTGTGGC GGGGCAGATG
TGCGACCACA TCGCCGTGAT GCAGCGCGGC GAGGTCGTGG AGTATGGCGA GACGCACAAG
GTGCTGGGCA ATCCGCAGCA TGCGTACACG CGGCAACTGA TCGATGCGGT GCCGCGGCTG
GCGTCGCCGA ATGCATTGGA CGAAACCCCT GCGATGGTGG CTTGA
|
|---|
| Protein sequence | MNATVTPMKP VQPVLDIVDL SICLPKGADR ALAVEGATLS VLPGQTLCVV GESGSGKSMI
ANAVMGLLPR PQVAPVAGKI LFEGVDLLSL TEAQMRELRG RRIGMVFQEP MTALNPVMRI
GEQIGEVFDA HGSVPAAEKR RRILAALADV GLPDPELLID SYPFRLSGGQ RQRVMIACAL
VLEPVLLIAD EPTTALDVTT QAQILKLVRE LQQRRGTAVL FITHDFGVVS EIADHVVVMQ
TGKVVEAGPA SAVLRAPQHP YTRKLIAAIP HGQAQRATPT DDVVRVLQVQ DLCKIYKSGN
GLFKRARSVQ AAKDVNFELH RGQTLGLVGE SGSGKSSVGR CLVGLAPFDS GRILFKGRNL
SQGEAFRREA AGRIQMVFQD PYASLNPRHR VGAAIAGGPI AQGVSKTEAM ARAMELLNLV
GLGADAAQRY PHEFSGGQRQ RIGIARALAM QPELLVADEP VSALDVSVQA QVLELFAQVR
EQFQLAMVFI THDLRVAGQM CDHIAVMQRG EVVEYGETHK VLGNPQHAYT RQLIDAVPRL
ASPNALDETP AMVA
|
|---|
| |