Gene Bpro_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0406 
Symbol 
ID4011546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp417236 
End bp420205 
Gene Length2970 bp 
Protein Length989 aa 
Translation table11 
GC content66% 
IMG OID637940091 
Productbifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 
Protein accessionYP_547268 
Protein GI91786316 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase 
TIGRFAM ID[TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.731593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTGC CATTTCCATA CCGGCCCGAA GGCCAGGTCG TTGCCAGCCT GCTGAAGTCA 
CTGGCGGGCG CACTCGACTG GGCCGCTGCC GTGCAGCCCG CCCAGCCCTG GGTGCAGGCC
GTGCGTGACA ACCCGCCGCC CTTCTGGGCC ATGGAGAGCC TGCTCAAGGA GTACCCGATT
TCCAGCGCCG AAGGCCTGGC CCTGATGCGG CTGGCCGAAG CCCTGCTGCG CGTGCCCGAT
GCCGAAACCG CGATTGCCCT GACGGCCGAC CAGCTGGGGC GGGCCGACTT TGAGACCGCC
GGCGACGGCG TGATGGCCCG GCTGTCGGCC TCGGCCATTG CGATGTCCAA GAAATTCTTG
CCGGAAGGCG GCCAGCCCAA CCTGATGAGC AAGCTCGGCG CGCGCACCGT GGTTGCGGCC
ACGCTGCGGG CGGTGCAACT GCTGGGCCGC CAGTTTGTGC TGGGCCAGAA CATTGGCGAG
GCCATGAATG AGGCCGACGA TGCGCGCAGG AAGATGCCGA ATCTGAGGTT CAGCTACGAC
ATGCTGGGCG AGGGCGCGCG CACCGACGCG GACGCCCTGC GCTACCTGGC CAGCTACACC
AATGCCATTG AATCAATAGC CGCCGGTGCA AGCAATGCAA GCCCAACGGA GCAAAACGAC
GGTATTTCCA TCAAGTTGAG CGCGCTGCAC CCGCGCTATG AAGACGCCCA GCGCGAGCGT
GTGATGGCCG AGCTGGTGCC GCGTGTCTGG GGCCTGTGCG AACTGGCGGC CCGCGCCAAC
ATCAATCTCA CGGTCGATGC CGAGGAAGTG GACCGGCTCG AGTTGTCGCT CGACATGTTT
GAAGCGCTGG CCGCCCGGGT GGCGCAGCAC TATCCGCAGT GGCAGGGCTT TGGCCTGGCC
ATGCAGGCGT ACCAGACCCG GTCGCTGGCG CTGATTGAAC AGGTGATCGC CATCGGCCGC
CGCTACAAGC TGCGCCTGAT GTGCCGCCTG GTCAAGGGCG CGTACTGGGA TTCGGAGATC
AAGCGAGCGC AGGAGCTGGG CCTGCCGCAT TACCCGGTGT TCACCCACAA GCACCACACC
GACGTGTCCT ACCTCGCCTG CGCGCAGGCC CTGCTGTCAG CGCCAGACGC GATTTACCCG
CAGTTTGCCG GGCACAACGC GGGCACGATT GCGGCCATCC TGCAAATGGC TTCCCGCAAC
GGGGTTCCCT TTGAACTGCA ACGCCTGCAC GGCATGGGCG AGGGCATCTT CCGCGAGGTG
CTGAAGAACC CGCTGATCAG CTGCCGTGTC TACGCGCCCG TCGGCGCGCA CCGCGACCTG
CTGGCCTACC TGGTGCGCCG CCTGCTCGAA AACGGTGCCA ATTCTTCCTT TGTGCATCAG
CTGGCCGATG AATCCGTGAA CATGGGCGAG CTGCTGACCT CGCCGCTGCG CCTGGAGCCC
GAGCCGTCCC TGCCACTGCC GCCCACGCTG TACGGCCCAG GCCGCCCCAA CAGCCTGGGG
CTGGACCTGA CCGTTGACAG CATGCGTGCA CCGCTGTTTG CGGCTTTTGA GTCGGTGCGG
GTTCCGACAG TGCCCGAGTT CGATGCCAGA TTGGCCACCA GCGCGGTAGC GATGGGTGTA
AGCAGCTATC AAAAATGGAG CAAGGTGGAG GTGGCCGAAC GCGCCGCCAT CCTGCGTCGC
GCCGCCGATG CGCTGCAGCA GCAGATGCCG AAGTTCTGCG CGTTGCTGGT GAAGGAAGCG
TTCAAAACCT GGGGCGACGC CGTGTCCGAG GTGCGCGAGG CGGTGGATTT CCTGCGCTAC
TACGCCAATG AAGCCGAGCG CATCATGGCG CCTGTCGCCT TGCCGGGGCC GACCGGCGAG
ACCAATGAAC TGCGCCTGAC GGCGCGCGGC GCCTGGGTCT GCATCAGCCC GTGGAATTTT
CCGCTGGCGA TTTTTACCGG CCAGGTCGCT GCCGCGCTGG CCACCGGCAA CGCCGTGCTG
GCCAAGCCCG CCGAGCAAAC GCCGGGCGTG GCCTGGGAGG CCGTCAAGCT GCTGCATGCG
GCTGGTGTGC CCGAAGGCGC GTTGCAGCTG CTGCACGGCC CAGGCGAAAC CGTGGGCGCC
GCGCTGGTGG CCGCACCGCA GGTGGCGGGC GTGGTGTTCA CCGGCTCCAC CCAGGTCGCC
AAAATCATCA ACCGGGCACT GGCCGCCAAA GACGGTCCCA TCGTGCCGCT GATCGCCGAG
ACCGGCGGCA TCAACGCCAT GCTGGTCGAC AGCACCGCGC TGCCCGAGCA GGTGGCCGAT
GCGGTGGTGC AAAGCGCGTT TCGCAGTGCC GGCCAGCGCT GCTCGGCGCT GCGCCTGCTG
TGCGTGCATG AAGGCATTGC CGACGGCGTG ATCGACATGA TCCAGGGCGC GGCGCAGGAG
CTGGTGCTGG GCAACCCGGC GGAGCTGGCC ACCGATGTCG GCCCGGTGAT TGATCGTGAG
GCCTTTGACA ACATCCAGCG CCACCTGAAA CGCTTGGGTA CAGACTCAAA AGTGCTGGTG
GCGCGCAGAG AAAATGGAGC AGAAGCTGCT GATTTGATGG CGAACAGCAT TGCGCCGGCG
GCGTTTGAAG TCAGCAGCCT GGCCGAAGTC AAGGACGAAA TCTTTGGCCC GGTGTTGCAA
ATCGTGCGCT GGGGCAGCGG CGAACTCAAA AGCCCTGAAG CCGTCATCGA ACAGATCAAC
GCCCTCGGCT ATGGCCTGAC GCTGGGCCTC CAGACCCGCA TCGACTCGCG CGCGCAAGCC
CTGGCCGCTG CCGCGCATGT GGGCAACATC TATGTCAACC GCAACATGAT TGGTGCGGTG
GTCGGTGTGC AGCCCTTCGG TGGCGAAGGG CTCAGCGGCA CCGGCCCGAA AGCCGGCGGG
CCGCATTACC TGTACCGCTT CTGCGCGGAG CAGACCGTGA CGGTCAATAC GACGGCGGCG
GGCGGCAACG CGGCGCTGTT GGCGGGCTAA
 
Protein sequence
MRLPFPYRPE GQVVASLLKS LAGALDWAAA VQPAQPWVQA VRDNPPPFWA MESLLKEYPI 
SSAEGLALMR LAEALLRVPD AETAIALTAD QLGRADFETA GDGVMARLSA SAIAMSKKFL
PEGGQPNLMS KLGARTVVAA TLRAVQLLGR QFVLGQNIGE AMNEADDARR KMPNLRFSYD
MLGEGARTDA DALRYLASYT NAIESIAAGA SNASPTEQND GISIKLSALH PRYEDAQRER
VMAELVPRVW GLCELAARAN INLTVDAEEV DRLELSLDMF EALAARVAQH YPQWQGFGLA
MQAYQTRSLA LIEQVIAIGR RYKLRLMCRL VKGAYWDSEI KRAQELGLPH YPVFTHKHHT
DVSYLACAQA LLSAPDAIYP QFAGHNAGTI AAILQMASRN GVPFELQRLH GMGEGIFREV
LKNPLISCRV YAPVGAHRDL LAYLVRRLLE NGANSSFVHQ LADESVNMGE LLTSPLRLEP
EPSLPLPPTL YGPGRPNSLG LDLTVDSMRA PLFAAFESVR VPTVPEFDAR LATSAVAMGV
SSYQKWSKVE VAERAAILRR AADALQQQMP KFCALLVKEA FKTWGDAVSE VREAVDFLRY
YANEAERIMA PVALPGPTGE TNELRLTARG AWVCISPWNF PLAIFTGQVA AALATGNAVL
AKPAEQTPGV AWEAVKLLHA AGVPEGALQL LHGPGETVGA ALVAAPQVAG VVFTGSTQVA
KIINRALAAK DGPIVPLIAE TGGINAMLVD STALPEQVAD AVVQSAFRSA GQRCSALRLL
CVHEGIADGV IDMIQGAAQE LVLGNPAELA TDVGPVIDRE AFDNIQRHLK RLGTDSKVLV
ARRENGAEAA DLMANSIAPA AFEVSSLAEV KDEIFGPVLQ IVRWGSGELK SPEAVIEQIN
ALGYGLTLGL QTRIDSRAQA LAAAAHVGNI YVNRNMIGAV VGVQPFGGEG LSGTGPKAGG
PHYLYRFCAE QTVTVNTTAA GGNAALLAG