Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0406 |
Symbol | |
ID | 4011546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 417236 |
End bp | 420205 |
Gene Length | 2970 bp |
Protein Length | 989 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637940091 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_547268 |
Protein GI | 91786316 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.731593 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTGC CATTTCCATA CCGGCCCGAA GGCCAGGTCG TTGCCAGCCT GCTGAAGTCA CTGGCGGGCG CACTCGACTG GGCCGCTGCC GTGCAGCCCG CCCAGCCCTG GGTGCAGGCC GTGCGTGACA ACCCGCCGCC CTTCTGGGCC ATGGAGAGCC TGCTCAAGGA GTACCCGATT TCCAGCGCCG AAGGCCTGGC CCTGATGCGG CTGGCCGAAG CCCTGCTGCG CGTGCCCGAT GCCGAAACCG CGATTGCCCT GACGGCCGAC CAGCTGGGGC GGGCCGACTT TGAGACCGCC GGCGACGGCG TGATGGCCCG GCTGTCGGCC TCGGCCATTG CGATGTCCAA GAAATTCTTG CCGGAAGGCG GCCAGCCCAA CCTGATGAGC AAGCTCGGCG CGCGCACCGT GGTTGCGGCC ACGCTGCGGG CGGTGCAACT GCTGGGCCGC CAGTTTGTGC TGGGCCAGAA CATTGGCGAG GCCATGAATG AGGCCGACGA TGCGCGCAGG AAGATGCCGA ATCTGAGGTT CAGCTACGAC ATGCTGGGCG AGGGCGCGCG CACCGACGCG GACGCCCTGC GCTACCTGGC CAGCTACACC AATGCCATTG AATCAATAGC CGCCGGTGCA AGCAATGCAA GCCCAACGGA GCAAAACGAC GGTATTTCCA TCAAGTTGAG CGCGCTGCAC CCGCGCTATG AAGACGCCCA GCGCGAGCGT GTGATGGCCG AGCTGGTGCC GCGTGTCTGG GGCCTGTGCG AACTGGCGGC CCGCGCCAAC ATCAATCTCA CGGTCGATGC CGAGGAAGTG GACCGGCTCG AGTTGTCGCT CGACATGTTT GAAGCGCTGG CCGCCCGGGT GGCGCAGCAC TATCCGCAGT GGCAGGGCTT TGGCCTGGCC ATGCAGGCGT ACCAGACCCG GTCGCTGGCG CTGATTGAAC AGGTGATCGC CATCGGCCGC CGCTACAAGC TGCGCCTGAT GTGCCGCCTG GTCAAGGGCG CGTACTGGGA TTCGGAGATC AAGCGAGCGC AGGAGCTGGG CCTGCCGCAT TACCCGGTGT TCACCCACAA GCACCACACC GACGTGTCCT ACCTCGCCTG CGCGCAGGCC CTGCTGTCAG CGCCAGACGC GATTTACCCG CAGTTTGCCG GGCACAACGC GGGCACGATT GCGGCCATCC TGCAAATGGC TTCCCGCAAC GGGGTTCCCT TTGAACTGCA ACGCCTGCAC GGCATGGGCG AGGGCATCTT CCGCGAGGTG CTGAAGAACC CGCTGATCAG CTGCCGTGTC TACGCGCCCG TCGGCGCGCA CCGCGACCTG CTGGCCTACC TGGTGCGCCG CCTGCTCGAA AACGGTGCCA ATTCTTCCTT TGTGCATCAG CTGGCCGATG AATCCGTGAA CATGGGCGAG CTGCTGACCT CGCCGCTGCG CCTGGAGCCC GAGCCGTCCC TGCCACTGCC GCCCACGCTG TACGGCCCAG GCCGCCCCAA CAGCCTGGGG CTGGACCTGA CCGTTGACAG CATGCGTGCA CCGCTGTTTG CGGCTTTTGA GTCGGTGCGG GTTCCGACAG TGCCCGAGTT CGATGCCAGA TTGGCCACCA GCGCGGTAGC GATGGGTGTA AGCAGCTATC AAAAATGGAG CAAGGTGGAG GTGGCCGAAC GCGCCGCCAT CCTGCGTCGC GCCGCCGATG CGCTGCAGCA GCAGATGCCG AAGTTCTGCG CGTTGCTGGT GAAGGAAGCG TTCAAAACCT GGGGCGACGC CGTGTCCGAG GTGCGCGAGG CGGTGGATTT CCTGCGCTAC TACGCCAATG AAGCCGAGCG CATCATGGCG CCTGTCGCCT TGCCGGGGCC GACCGGCGAG ACCAATGAAC TGCGCCTGAC GGCGCGCGGC GCCTGGGTCT GCATCAGCCC GTGGAATTTT CCGCTGGCGA TTTTTACCGG CCAGGTCGCT GCCGCGCTGG CCACCGGCAA CGCCGTGCTG GCCAAGCCCG CCGAGCAAAC GCCGGGCGTG GCCTGGGAGG CCGTCAAGCT GCTGCATGCG GCTGGTGTGC CCGAAGGCGC GTTGCAGCTG CTGCACGGCC CAGGCGAAAC CGTGGGCGCC GCGCTGGTGG CCGCACCGCA GGTGGCGGGC GTGGTGTTCA CCGGCTCCAC CCAGGTCGCC AAAATCATCA ACCGGGCACT GGCCGCCAAA GACGGTCCCA TCGTGCCGCT GATCGCCGAG ACCGGCGGCA TCAACGCCAT GCTGGTCGAC AGCACCGCGC TGCCCGAGCA GGTGGCCGAT GCGGTGGTGC AAAGCGCGTT TCGCAGTGCC GGCCAGCGCT GCTCGGCGCT GCGCCTGCTG TGCGTGCATG AAGGCATTGC CGACGGCGTG ATCGACATGA TCCAGGGCGC GGCGCAGGAG CTGGTGCTGG GCAACCCGGC GGAGCTGGCC ACCGATGTCG GCCCGGTGAT TGATCGTGAG GCCTTTGACA ACATCCAGCG CCACCTGAAA CGCTTGGGTA CAGACTCAAA AGTGCTGGTG GCGCGCAGAG AAAATGGAGC AGAAGCTGCT GATTTGATGG CGAACAGCAT TGCGCCGGCG GCGTTTGAAG TCAGCAGCCT GGCCGAAGTC AAGGACGAAA TCTTTGGCCC GGTGTTGCAA ATCGTGCGCT GGGGCAGCGG CGAACTCAAA AGCCCTGAAG CCGTCATCGA ACAGATCAAC GCCCTCGGCT ATGGCCTGAC GCTGGGCCTC CAGACCCGCA TCGACTCGCG CGCGCAAGCC CTGGCCGCTG CCGCGCATGT GGGCAACATC TATGTCAACC GCAACATGAT TGGTGCGGTG GTCGGTGTGC AGCCCTTCGG TGGCGAAGGG CTCAGCGGCA CCGGCCCGAA AGCCGGCGGG CCGCATTACC TGTACCGCTT CTGCGCGGAG CAGACCGTGA CGGTCAATAC GACGGCGGCG GGCGGCAACG CGGCGCTGTT GGCGGGCTAA
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Protein sequence | MRLPFPYRPE GQVVASLLKS LAGALDWAAA VQPAQPWVQA VRDNPPPFWA MESLLKEYPI SSAEGLALMR LAEALLRVPD AETAIALTAD QLGRADFETA GDGVMARLSA SAIAMSKKFL PEGGQPNLMS KLGARTVVAA TLRAVQLLGR QFVLGQNIGE AMNEADDARR KMPNLRFSYD MLGEGARTDA DALRYLASYT NAIESIAAGA SNASPTEQND GISIKLSALH PRYEDAQRER VMAELVPRVW GLCELAARAN INLTVDAEEV DRLELSLDMF EALAARVAQH YPQWQGFGLA MQAYQTRSLA LIEQVIAIGR RYKLRLMCRL VKGAYWDSEI KRAQELGLPH YPVFTHKHHT DVSYLACAQA LLSAPDAIYP QFAGHNAGTI AAILQMASRN GVPFELQRLH GMGEGIFREV LKNPLISCRV YAPVGAHRDL LAYLVRRLLE NGANSSFVHQ LADESVNMGE LLTSPLRLEP EPSLPLPPTL YGPGRPNSLG LDLTVDSMRA PLFAAFESVR VPTVPEFDAR LATSAVAMGV SSYQKWSKVE VAERAAILRR AADALQQQMP KFCALLVKEA FKTWGDAVSE VREAVDFLRY YANEAERIMA PVALPGPTGE TNELRLTARG AWVCISPWNF PLAIFTGQVA AALATGNAVL AKPAEQTPGV AWEAVKLLHA AGVPEGALQL LHGPGETVGA ALVAAPQVAG VVFTGSTQVA KIINRALAAK DGPIVPLIAE TGGINAMLVD STALPEQVAD AVVQSAFRSA GQRCSALRLL CVHEGIADGV IDMIQGAAQE LVLGNPAELA TDVGPVIDRE AFDNIQRHLK RLGTDSKVLV ARRENGAEAA DLMANSIAPA AFEVSSLAEV KDEIFGPVLQ IVRWGSGELK SPEAVIEQIN ALGYGLTLGL QTRIDSRAQA LAAAAHVGNI YVNRNMIGAV VGVQPFGGEG LSGTGPKAGG PHYLYRFCAE QTVTVNTTAA GGNAALLAG
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