| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0402 |
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| Symbol | |
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| ID | 4011581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 413237 |
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| End bp | 414058 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637940087 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_547264 |
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| Protein GI | 91786312 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.554562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCGC CCCGCAGATG GCCGGAGAGC CCCATGAAGT TTGCGTTTCC CGAATGGCCC
GGGCACTGGA GCCGGCAACA GCGCAGCAGT GCGACCATGG TGCTGGCCAG CGTGGTGCTG
GTGGTCTTGC TGTGGCTGAT GGCCATTCCG CTGGCCCTGG TGCCCGAACC GATTGGCGTG
AATGCGCAGT CCTTTGCCAA AGGCACCCGT GTCACGGTGC AGCTCACCGT GATCGCCGGG
CTGGTTGGCA TTGTCATCGG TGTGCTGGCG GCCCTGGGCA AGATATCCCG GCTGCCGCCG
CTGCGCTGGA TCGCTTCGCT CTACATCTGG GTCGTGCGCG GCACGCCGCT GCTGGTGCAG
GTGCTGTTCG TCTTCCTGGC CTTGCCAACG CTGGTGCCGG CGCTGCAGCT GAGCGATTTC
TCCTCGGCCT GTGTGGCGCT GGCCTTCAAC GCCGGGGCCT ACAACGCCGA GGCCATCCGC
AGCGGCCTTC TTGCGGTACC GAAGGGGCAG ATCGAGGCTG CCCGTTCCCT GGGGCTGTCG
AGTTTTTTCA CCTTCATCGA CGTGACCTTT CCGCAGGCTT TCAAGATATC GCTGCCGCCG
CTGGTCAACA ACACGGTGGC CCTGCTCAAG GACTCGTCGC TGGCCTATGC GATCGGCGTC
GTGGAACTGA CCAATGTGGG CAATCGCATC CAGGCCGCCA CGTTCCAGCC GCTGCCCACG
CTGGTGACCA CGGCGGTCAT CTACCTGGTG CTCACGACCG TGCTCACCCA GATTTCGGGC
GCGGTGGAGC GCCGCTACGA CGTGGAAGGA CGCCAGCCAT GA
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| Protein sequence | MPSPRRWPES PMKFAFPEWP GHWSRQQRSS ATMVLASVVL VVLLWLMAIP LALVPEPIGV
NAQSFAKGTR VTVQLTVIAG LVGIVIGVLA ALGKISRLPP LRWIASLYIW VVRGTPLLVQ
VLFVFLALPT LVPALQLSDF SSACVALAFN AGAYNAEAIR SGLLAVPKGQ IEAARSLGLS
SFFTFIDVTF PQAFKISLPP LVNNTVALLK DSSLAYAIGV VELTNVGNRI QAATFQPLPT
LVTTAVIYLV LTTVLTQISG AVERRYDVEG RQP
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