| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0395 |
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| Symbol | |
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| ID | 4011574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 407163 |
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| End bp | 408299 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637940080 |
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| Product | twitching motility protein |
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| Protein accession | YP_547257 |
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| Protein GI | 91786305 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0573301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCGCG ATCAAGCCAG TAAATTCATC CACGACTTGC TGAAGCTCAT GGTCAGCCGC
AACGGCAGCG ACCTGTTCAT CACCGGCGAC TTTCCGCCGG CCATGAAGGT GGACGGCAAA
ATAACCAAAG TCTCGCCACA GCCGCTCAAT GCCGGCCACA CGCTGGCCCT GGCGCGCGCC
ATCATGAACG ACAAGCAGGC CGCGGAGTTT GAACGCACCA AGGAATGCAA TTTCGCCATT
TCGCCGCCAG GCGTGGGGCG CTTTCGCGTA AACGCCTTCA TCCAGCAGGG CAAGGTCGGC
ATGGTGATGC GGACGATCCC GGCCGTGCTG CCCACGATTG ACGGGCTGGG CGTGCCCCAG
GTGCTCAAGG ATGTGGTGAT GAGCAAGCGG GGGCTGACGA TTCTCGTCGG CGCCACCGGT
TCGGGCAAGT CCACCACACT GGCGGCCATG GTGGACTGGC GCAACGAACA GTCATTCGGC
CACATCATCA CGATTGAAGA CCCGGTGGAG TTTGTCCATG CGCACAAGAA CTGCGTGATC
ACGCAGCGCG AAGTGGGCCT GGACACCGAC AGCTGGGAAG CGGCGCTGAA AAACACCCTG
CGCCAGGCGC CTGATGTGAT CCTGATGGGC GAGATCCGTG ACCGTGAAAC CATGGAGCAT
GCCATCGCCT TTGCGGAAAC CGGCCACCTG TGCCTGGCCA CGCTGCACGC CAACAGCGCC
AACCAGGCGC TGGACCGCGT GATCAACTTC TTCCCCGAAG AACGCCGTAC CCAGTTGCTG
ATGGATTTGT CGCTCAACCT CAAGGCCATG ATTTCGCAGC GCCTGGTCCC CAAGCAGGAT
GGCAAGGGCC GCTTTGCGGC GGTCGAGGTC ATGCTCAATT CACCGCTGAT CTCCGACCTG
ATCTTCAAGG GCGATGTTTC CGAGATCAAG GAGATCATGA AGAAAAGCCG CAACCTCGGC
ATGCAGACTT TCGATCAGGC GCTGTACGAC GCCTTTGAAA GCCACTTCAT CACCTACGAG
GATGCACTGC GCAACGCCGA TTCGGTGAAC GACCTGCGTC TGCAGATCAA GCTCAATTCG
CAGCGCGCCA AGTCGACCGA CCTTGCCGCG GGCACCGAGA GTTTCGCCAT CGTATAA
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| Protein sequence | MERDQASKFI HDLLKLMVSR NGSDLFITGD FPPAMKVDGK ITKVSPQPLN AGHTLALARA
IMNDKQAAEF ERTKECNFAI SPPGVGRFRV NAFIQQGKVG MVMRTIPAVL PTIDGLGVPQ
VLKDVVMSKR GLTILVGATG SGKSTTLAAM VDWRNEQSFG HIITIEDPVE FVHAHKNCVI
TQREVGLDTD SWEAALKNTL RQAPDVILMG EIRDRETMEH AIAFAETGHL CLATLHANSA
NQALDRVINF FPEERRTQLL MDLSLNLKAM ISQRLVPKQD GKGRFAAVEV MLNSPLISDL
IFKGDVSEIK EIMKKSRNLG MQTFDQALYD AFESHFITYE DALRNADSVN DLRLQIKLNS
QRAKSTDLAA GTESFAIV
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