| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0380 |
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| Symbol | |
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| ID | 4011597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 392541 |
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| End bp | 394241 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637940065 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_547242 |
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| Protein GI | 91786290 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0996826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACCC ACACGCTGCC GTCCACGCCC GCCAAACGCC ATTTCGCCTG CTCATTGGCT
CCTGCATCGG CACTTTCGTT GGCGCTGGCC GCCACACTTG GCCTGACGGC CACCGTTGCG
CTGGCGCAGG AAAAAACGTT GCGTATCGCG ATGACTGCCG CCGATATCCC GCGCACATTG
GGTCAGCCCG ACCAGGGCTT TGAGGGCAAT CGCTTTACAG GTATCCCGAT TTACGACTCG
CTCACCCAAT GGGATCTTTC CAAGGCCAAT GCACCCAGCG TGCTGATCGC CGGGCTCGCG
ACCTCCTGGG CGGTGGATGC CAAGGACAAG ACCAAGTGGG TCTTCAAGTT GCGCCCTGGC
GTCAAGTTCC ATGACGGCTC GGCCTTCAAT GCCGATGCGG TGGTGTGGAA TGTGGCCAAG
GTGTTCGACA AAGAGGCGCC GCAGTTCGAC CCGAGCCAGG TGGGGGTGAC TGCTTCGCGC
ATGCCAACGC TGCGCAGCGC ACGCAAAATT GACGACATGA CGGTCGAGTT CACCACCAGT
GAGCCCGACT CATTCCTGCC CATCAATCTG ACCAACCTGT TCATGGCCTC GCCCGCCCAG
TGGGATGCCA AGCTGAAGGC CGTTCCTGCC AGCGTGACTG CTCCGGCAGA ACGCTCGAAG
GCGGCGTGGA CCGCCTTTGC TGCTGATCCA GCCGGCTCCG GCCCTTTCAA GGTAACCCGC
TTTGTCGCGC GCGAACGGCT TGAGCTGGCG GCCCATAAAA CTTATTGGGA TGCCAGGCGC
GTGCCCAAAA TCGACAAGGT CGTGATGTTG CCCATGCCCG AGGCCAATGC CCGCACGGCC
GCTCTGCTCG GTGGCCAGGT TGACTGGATC GAAGCGCCGG CACCCGACGC CATGCCGCAG
ATCAAGCAGC GCGGCTTCAC TATCTACTCC AACGCTCAGC CCCACGTCTG GCCGTGGCAG
CTCTCATTCG CCGAGGGATC GCCCTGGCTC GACAAGCGCG TGCGCCAGGC GGCCAATCTT
TGCGTGGACC GTGGTGGCCT GTCGCAACTT CTGGGTGGCA TGATGGCCGA ACCCAAGGGC
ACCGTGCCGC CCGGCCACCC GTGGTGGGGC AATCCGAAGT TCGACATCAA ATATGACGTG
AAGGGGGCGC AGGCCCTCAT GACGCAAGCC GGTTTTTCGG CGGCCAAACC CGTCAAGGTG
AAGGTGCAGA TATCAGCCTC GGGCTCGGGT CAGATGCAGC CTCTGCCCAT GAACGAGTTC
ATGCAGCAAT CGCTCAAGCA GTGCTTTTTT GACGTGCAGT TTGATGTGAT CGAGTGGAAC
ACGCTGTTCA CCAACTGGCG CAAGGGGGCC AAGGATCCCT CGGCCAACGG GGCCAACGCG
GTCAATGTCA GCTTTGCAGC CATGGACCCC TTCTTTGCCA TGGTGCGCTT CGTGAGCACC
AAAACCTTCC CGCCAGTTTC AAACAACTGG GGCTACTATG GCAATGCGGA TGTCGACAAA
CTGGTGGCTG ACGCGCGTAC CAGCTTCGAT GAAAAGTCGC GCGACGCGGC GCTTGCCAGG
CTCCACGCCC ATATCGTGGA AGATGCGCCC TTTGTCTGGG TCGCGCACGA CGTCGGTCCG
CGCGCCATGT CTGCAAAGGT CAAGAACGTG GTGCAGCCCA AAAGCTGGTT TATTGACATC
GCCACCATGA CGATGGACTG A
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| Protein sequence | MSTHTLPSTP AKRHFACSLA PASALSLALA ATLGLTATVA LAQEKTLRIA MTAADIPRTL
GQPDQGFEGN RFTGIPIYDS LTQWDLSKAN APSVLIAGLA TSWAVDAKDK TKWVFKLRPG
VKFHDGSAFN ADAVVWNVAK VFDKEAPQFD PSQVGVTASR MPTLRSARKI DDMTVEFTTS
EPDSFLPINL TNLFMASPAQ WDAKLKAVPA SVTAPAERSK AAWTAFAADP AGSGPFKVTR
FVARERLELA AHKTYWDARR VPKIDKVVML PMPEANARTA ALLGGQVDWI EAPAPDAMPQ
IKQRGFTIYS NAQPHVWPWQ LSFAEGSPWL DKRVRQAANL CVDRGGLSQL LGGMMAEPKG
TVPPGHPWWG NPKFDIKYDV KGAQALMTQA GFSAAKPVKV KVQISASGSG QMQPLPMNEF
MQQSLKQCFF DVQFDVIEWN TLFTNWRKGA KDPSANGANA VNVSFAAMDP FFAMVRFVST
KTFPPVSNNW GYYGNADVDK LVADARTSFD EKSRDAALAR LHAHIVEDAP FVWVAHDVGP
RAMSAKVKNV VQPKSWFIDI ATMTMD
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