Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0378 |
Symbol | |
ID | 4011595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 390220 |
End bp | 391011 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637940063 |
Product | IclR family transcriptional regulator |
Protein accession | YP_547240 |
Protein GI | 91786288 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.105767 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.274067 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCCA CAATCCGTCA ACCGCCTGCC GTCAGTTCGC TGTTCAACCA GTCCCTTGAA AAAGGGCTGG CGGTTCTGCG CGCCTTTGAT GCTGCACACC GGACGTTGAC GTTGGCCGAG CTGGCTACGC TGACCGGCAT GAGCAAAGGG TCGGCACAGC GCACCGTGCA CACGCTGCAG CAACTGGGTT ATGTGGGCAA GCACCCGCAA ACACGGCGCT TTCAGCTGCT TCCCAGGGTG ATAGAAATCG GCTTTAACTA CCTAGCTGCG CATCCTTTGA TACGCGTGGC CAATCCTTAT CTTTCGCAGC TCGCCAATGC CAGCGGCGAG ACGGCCAGCC TCACCGAGCC GGTAGGGCTG GACATGGTCT ACGTGGCCCA GTTGGTCACC TCCAAGTTCA TTCCGGTGCA TACGCCAGTG GGCATGCGAA TTCCCATGTA CTGCACCAGC TCTGGCAGGG CCTGGCTCAG CGCGCTGCCC GACGCTCAGG TACGGGCCGT CCTGGAGGCA TCGACACGCG TGGCGCGCAC ACCGTACACG CTGACGGATG TCGACGCCAT CCTTGCGCGT GTTGCGGCCT GCCGGCAGGT CGGTTATGCC AGCAACTGCG AGGAGTTGTT TCTGGGTGAC ATGGGCATCG GTGCACCGAT TCTTGACAGC AACGGACAGG CCGTCGCGGC TGTCCACCTT TCCCCGCCGA CGAGCCGCTG GACGATGGAA GAGGCACAGA GAAAGTTGTC GCCCATGGTG ATCGAGTGCG CACGGGCTAT CTCGCAGTCC ATCGCGCATT AA
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Protein sequence | MTSTIRQPPA VSSLFNQSLE KGLAVLRAFD AAHRTLTLAE LATLTGMSKG SAQRTVHTLQ QLGYVGKHPQ TRRFQLLPRV IEIGFNYLAA HPLIRVANPY LSQLANASGE TASLTEPVGL DMVYVAQLVT SKFIPVHTPV GMRIPMYCTS SGRAWLSALP DAQVRAVLEA STRVARTPYT LTDVDAILAR VAACRQVGYA SNCEELFLGD MGIGAPILDS NGQAVAAVHL SPPTSRWTME EAQRKLSPMV IECARAISQS IAH
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