Gene Bpro_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0378 
Symbol 
ID4011595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp390220 
End bp391011 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content61% 
IMG OID637940063 
ProductIclR family transcriptional regulator 
Protein accessionYP_547240 
Protein GI91786288 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.105767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.274067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCA CAATCCGTCA ACCGCCTGCC GTCAGTTCGC TGTTCAACCA GTCCCTTGAA 
AAAGGGCTGG CGGTTCTGCG CGCCTTTGAT GCTGCACACC GGACGTTGAC GTTGGCCGAG
CTGGCTACGC TGACCGGCAT GAGCAAAGGG TCGGCACAGC GCACCGTGCA CACGCTGCAG
CAACTGGGTT ATGTGGGCAA GCACCCGCAA ACACGGCGCT TTCAGCTGCT TCCCAGGGTG
ATAGAAATCG GCTTTAACTA CCTAGCTGCG CATCCTTTGA TACGCGTGGC CAATCCTTAT
CTTTCGCAGC TCGCCAATGC CAGCGGCGAG ACGGCCAGCC TCACCGAGCC GGTAGGGCTG
GACATGGTCT ACGTGGCCCA GTTGGTCACC TCCAAGTTCA TTCCGGTGCA TACGCCAGTG
GGCATGCGAA TTCCCATGTA CTGCACCAGC TCTGGCAGGG CCTGGCTCAG CGCGCTGCCC
GACGCTCAGG TACGGGCCGT CCTGGAGGCA TCGACACGCG TGGCGCGCAC ACCGTACACG
CTGACGGATG TCGACGCCAT CCTTGCGCGT GTTGCGGCCT GCCGGCAGGT CGGTTATGCC
AGCAACTGCG AGGAGTTGTT TCTGGGTGAC ATGGGCATCG GTGCACCGAT TCTTGACAGC
AACGGACAGG CCGTCGCGGC TGTCCACCTT TCCCCGCCGA CGAGCCGCTG GACGATGGAA
GAGGCACAGA GAAAGTTGTC GCCCATGGTG ATCGAGTGCG CACGGGCTAT CTCGCAGTCC
ATCGCGCATT AA
 
Protein sequence
MTSTIRQPPA VSSLFNQSLE KGLAVLRAFD AAHRTLTLAE LATLTGMSKG SAQRTVHTLQ 
QLGYVGKHPQ TRRFQLLPRV IEIGFNYLAA HPLIRVANPY LSQLANASGE TASLTEPVGL
DMVYVAQLVT SKFIPVHTPV GMRIPMYCTS SGRAWLSALP DAQVRAVLEA STRVARTPYT
LTDVDAILAR VAACRQVGYA SNCEELFLGD MGIGAPILDS NGQAVAAVHL SPPTSRWTME
EAQRKLSPMV IECARAISQS IAH