| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0340 |
|---|
| Symbol | |
|---|
| ID | 4011633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 362086 |
|---|
| End bp | 362589 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637940025 |
|---|
| Product | transposase IS3/IS911 |
|---|
| Protein accession | YP_547203 |
|---|
| Protein GI | 91786251 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2963] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.394046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.320291 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAC CTGCAGGCAC CCCCTCCGAA TCCGCCGTCA CGCCAGCAGC ACCGATGCTG
GTGCTGGACC GCAAGAGCAA CGGCCGCGCC ATCTACGACC CCGAAGCCAA ACGAGCCTTG
GTGCAGCAGT GCCTGCAGCC CGGCGTATCG GTGGCGGCCA CAGCCCTGCG CGCCGGCGTG
AACGCCAATC TGTTGCGCAA GTGGATCACC AAACACCAGC GCGGCATCGG CGAGCGAGCA
TCTGCGCCGC CCAGCACCAT CGCTGGCGAC CGGATGCCCG TCGTGCTGCG CTGCGATACT
GCTGCCGCGA TGACCGCCGC ACCAGCGCCT GGCAGCTTGG CGGGCGCGCC GGCTCCCATC
ACTATCGAAC TGCACGGTGC GCGCGTGCAC GTTGCCAGCG GCGTCGATCC TACAACGCTC
GCAGCCGGGT GCGGGCGTTG CGCACCACCG CATGATCGCG CCCCCATCGG GCACGCGGGT
GTGGCTGGCC GCCGGCATCA CTGA
|
|---|
| Protein sequence | MTTPAGTPSE SAVTPAAPML VLDRKSNGRA IYDPEAKRAL VQQCLQPGVS VAATALRAGV
NANLLRKWIT KHQRGIGERA SAPPSTIAGD RMPVVLRCDT AAAMTAAPAP GSLAGAPAPI
TIELHGARVH VASGVDPTTL AAGCGRCAPP HDRAPIGHAG VAGRRHH
|
|---|
| |