| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0339 |
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| Symbol | |
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| ID | 4011632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 360199 |
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| End bp | 361746 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637940024 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_547202 |
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| Protein GI | 91786250 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.389244 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTCAT ACGAAGATCG CATTCGAGCA GTTAGGCTCT ACATAAAACT CGGGAAACGC
ACAGGTGCGA CCATTCGGCA ATTGGGTTAC CCGACAAAGA ATGCGCTTAA GAGCTGGCAT
CGAGAATACG AGCAAGGTGG CAATTTGCGG GTGGGCCATG TGCGTTCAAG ATCAAAATAC
TCAGCCGAAC AGAAAAGAGT TGCCGTCGAG CATTACCTAA ACCACGATCG CTTTCTTGCT
GGAACTCGAA AAGCACTGGG ATATCCGTGC CGCGATACTC TCGCAGCCTG GGTCCACGAG
TTGCTCCCCG AAACACGAAG AAAAGTTGTC GGCAAGGCGC AGGCCGTGCT GCTCCCCAGA
GAAGCAAAGC AGGCGGCAGT CATCGAGCTG TGCACTCGGC AGGTAAGCGC GCAAGCAATT
GCTCAAAAGC TTGGCGTGAC TCGACCAACG TTGTACAAGT GGAAAAATCA ACTACTCGGT
CGAGAGGCTC CCGCATCCAT GAAGCGAAGT AACGATTCCG GGTCAACTCC CAAGCCGAAA
GAACTCACGG AACTACAGCA GCAAGTTGAG TTGCTCGAAC GTGACATCCG GCGTTTGCAG
CTTGAACATG ACCTATTAAA GAAGGCCAAT GAACTGTTAA AAAAAGGCCT GGGCGTCGAT
ATGCAACTCC TGACCAACCG GGAGAAGACA TTGCTGGTTG ACGCCCTCAA AGAGCTCTAT
GCCCTGCCAG AGCTCCTTGC TCAGTTGGAT CTGGCGCGCA GCTCGTACTT CTACCATCGA
GCCCGTGTAA AGATGGCGGA CAAGTACCTT GCAGTGCGGC AAACCCTCAC CGACATCTTC
GAGCTGAACC ACCGCTGTTA CGGCTACCGC AGGCTGCAGG CTTCGTTGAC CAGGCAGTGC
GTCACCATCT CTGAGAAGGT CGTGCAGCGG TTGATGAAAC AAGAGAGCTT GGTCGTTGCC
AAGCCTAAGC GGCGTCGGTA CGGCTCCTAC TTGGGCGAAA TCAGCCCAGC GCCCGAGAAC
CTCATCAATC GCGACTTCCA CGCAGCGGCC CCGAACGAGA AGTGGCTCAC CGACATCACA
GAGTTCCAGA TCCCGGCCGG CAAGGTGTAC CTATCGCCCA TCATCGACTG CTTCGATGGC
CTGGTCATCA GCTGGACCAT TGGGACGCAT CCCGACGCTG AGCTCGTCAA CACGATGCTG
GATGCAGCCA TCGAGACGGT GGCCGGCGGC AATGACCGGC CCGTCGTCCA CTCTGATCGT
GGAGCACACT ATCGCTGGCC CGGTTGGCTA TCGAGGATCG GTGACGCGAA GTTGATTCGC
TCGATGTCGC GCAAGGGGTG TTCGCCTGAC AACGCGGCCT GCGAGGGTTT CTTCGGGCGA
TTGAAAACGG AACTGTTCTA CCCTCGGGAC TGGAAGACCA CAACCATTGA ACAGTTCATT
CAGGTAGTCG ATTCCTACAT CCGCTGGTAC AACGAGAAGC GGATCAAGAT ATCTCTTGGC
TCTCTTAGCC CCATCGAATA CCGAGAGAGT CTTGGACTTA CGGCATAA
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| Protein sequence | MYSYEDRIRA VRLYIKLGKR TGATIRQLGY PTKNALKSWH REYEQGGNLR VGHVRSRSKY
SAEQKRVAVE HYLNHDRFLA GTRKALGYPC RDTLAAWVHE LLPETRRKVV GKAQAVLLPR
EAKQAAVIEL CTRQVSAQAI AQKLGVTRPT LYKWKNQLLG REAPASMKRS NDSGSTPKPK
ELTELQQQVE LLERDIRRLQ LEHDLLKKAN ELLKKGLGVD MQLLTNREKT LLVDALKELY
ALPELLAQLD LARSSYFYHR ARVKMADKYL AVRQTLTDIF ELNHRCYGYR RLQASLTRQC
VTISEKVVQR LMKQESLVVA KPKRRRYGSY LGEISPAPEN LINRDFHAAA PNEKWLTDIT
EFQIPAGKVY LSPIIDCFDG LVISWTIGTH PDAELVNTML DAAIETVAGG NDRPVVHSDR
GAHYRWPGWL SRIGDAKLIR SMSRKGCSPD NAACEGFFGR LKTELFYPRD WKTTTIEQFI
QVVDSYIRWY NEKRIKISLG SLSPIEYRES LGLTA
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