| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0306 |
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| Symbol | |
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| ID | 4011677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 326088 |
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| End bp | 330140 |
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| Gene Length | 4053 bp |
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| Protein Length | 1350 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637939991 |
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| Product | hypothetical protein |
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| Protein accession | YP_547169 |
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| Protein GI | 91786217 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01965] VCBS repeat
[TIGR03661] type 1 secretion C-terminal target domain (VC_A0849 subclass) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAAT TCGCAACCGT CGCCGCCATC ACGGGAAATG GCTCGGTCCT CGCTGTCGAC
GTGCAGGGCA GGACCCGCGT CCTCAAGGTT GGTGACACCC TGCAAAAGGG TGAAACCGTG
CGCACCGTGG GCGACGTCCG GGTCGAGCTC CTGATGGAAG ACGGCAGCCT GCTGGCTGTT
GCGCCCGCGC AAAGCATCCG CCTGGATGAA AACGTGGTCC AGTCCGACCA GCGACCCACG
GCCCAGGACA GCGCGGTCAC CACGCCGGCC ACGGCAGACG CCGTCATCCA GGCGCTCGAA
CGCGGGACCG ATCTGAACCA GTCACTCGAA GCCACCGCGG CCGGTTTGGT CCCCGGCGGC
GGTGTTGACG GCGGCAGCAG CTTTGTGCAG TTGCTGCGCA TCGCCGAGGG TGTGAGCCCG
CTGGCCTACG AGTACAACTT TGTGCCGCCC GAGCTGCAGC CTGATATTGA GTCGATTCCC
GAGCCGGTGC CACCCACGGT CAGCGTCGGC GTTACCGTGG GTGTGCAGGT CGGTGTAGGC
GAGGGCGGCC CGGGCCTGAT CACCGGCGAA ATGATCCAGG GCACAGTCTC GACCGCCGAT
GTGATCGAGG GCTCCGGCGG CGGCAGCAAG GCCGTCACCT TCCTGATTAC CCTGAACCAG
GTCTCCACGA CCGATGTGAC GGTCACCTAC ACCATCGTGC CCGGCACCGC GAGCAATCCG
GCGGACTATT TCGACGGTGC GGTCACCGGC ACGGTTACCA TCCCGGCCGG CTATATCGGC
TTCTTCGTGA CTGAAAACAT TGTGGGAGAC ATCCTGGTCG AAGGCAATGA AACCTTCACC
ATTGTCCTGA GCAATCCGAT CGGGGCCACC CTGATCAACG ACACGGCGAC CGTGACCATC
ATTGACGATG ACCACGCACC GGTGGCGGTC GACGACAGCA ACAGCCTGAC TGAAGACCAG
ATCTCCGTCT CGGGCAACGT GATCCCCAAC GATACCGATG CAGACGGCCA GACCCTGTCC
GTGGTCGGCC CCTCGATCAC GGCGACCAAT GCCTACGGCA CGCTGGTCAT CGACAGCGCG
ACGGGCGGCT ACACCTTCAC GCTGAACGAA GCCACCCAGG CAGCGGCGCA GGCACTGGAC
GACGGCGAAT CCATCAACAT GGTGTTTGCC GATGTCTACC AGGTGACCGA TGGCGCCAAC
CTGAGCAATC TGGCCGATGT GAGCATCACC ATCACCGGCA CCAATGACGG GCCAATTATC
ACCGCCGATC CCGGCAATGA AGGCGGCAAC GACGTGGTGT ACGAGTCTGG TCTGGCAATC
GGTTCCGATG CGGCGGCCGG CACCGAATTT GCATTCGGCA CCTTCACGGT ATCGGATGCG
GACGGCCTGG ACGACATCCA GAGCGTCACC ATCAACGGCG TCACCGTCGC GATTGGCAGC
CTGGTGGGCC AGAGCTTCGC GGGTACGAAC GGCACCCTGA CGGTCACCGC CTACGATGCC
GGCACCGGCG TCGCCAGCTA CACCTATGAG CTGACCAGCC CGACCACGGA TGTGGATGGC
ACGGAGACCG ATGTCTTCAC GCTGACCACG TCAGACGGCA CGGCCACTTC GGCACCGGCC
GCGATCACCA TTGAGATCAT TGACGACGTG CCGACGGCAC GTGCGGACAC GGACAGCGTG
GCCGAGGGCG CGGATACGAC CGGCAACGTG CTGACGGGCG CGGGCACCAC GAGCGGGGGC
GCTGGCGCCG ACACGGCCGG TGCCGATGGC TTTGGTGCCG GCGCGGTGGT GGGCGTGGCG
GCGGGCAGCA ACACAGCCGT GCCGGTGTCC GGTGGTGTGG GCGGAGGCAT TGCCGGCACC
TACGGCACGC TGACGCTGAA CGCGGACGGC AGCTACACCT ACGAGGCCAA TCCTGATGCG
GTGACGAGCA ACCAGACCGA CACGTTCGTG TACACCATCG TGGATGGCGA CGGCGACCTG
TCGACCACGA CGCTGACGAT CAGCGTGAAC AACGTCACGG TGACGGCAAG CGACACGGAC
GCGCTGGTCA ACGAAGCGGG CCTGCCCGTG GTGGGCAGCG ATGCGGCGAG CAACAGCGAA
ATCTTCAACG GCGCGATCAC CCCGTCGGGC GGCACGGGCC CGTACACCTA CACGCTGACC
AGCACCGCCA ACGGTGCCTA TGGCAACCTG GTGCTCAATG CCGACGGCAC TTACACCTAC
ACGCTGGACA CGACCTTCGA CGGTGCGACG CTCAACAACG GCGTCACCAC CGAGCAGGAC
AAGGACAGCT TCAGCTACAC GGTGACGGAC GCCAACGGCA ACACCACCAC CGGCACCATC
CTGGTGGACA TCATTGACGA TGTGCCCGTT GTTCTGGATA AGACGGATCT TATTTATTCG
AATTCCAGCA ATCCGTCTCC TGGTGGCACG GGCGTTTTCG ACTACATCAT CGGCGCGGAC
AGCCGGACGA CGTTCAGTTC ATCCGACTCC GATTTTTCGG CAATCACGCT GGCCGGCATG
GTCGGCGCGA CGGCAATTTC CACACCATCC GTGACCTGGG CTTCCGAAGA TTCGAACGAG
GCGGTCTTCG ATGTGCAGTT CTCCTATGCA GCGAATCCGC TCACCCCTGG CGTACTGACA
GAGGCCAATG GGACGCTCAC CTTCGACAAG GTAAGCGGTA CCTATGAGCT AACGCTGGAT
GAGCCGATCG AAAGCTTCAG CATTCTGACC ACCAGCGGTA CGCTTTCCAA AGAAAGCTAC
AACCTGGTTG GGCCGTCGGA AGCTCAGCCG GAAATCGTGG TGTCCAAGCT GGCAGAAGAG
TTCTTTGTGC GGTTTACCGG TGGCGAAGAG CAGGGCGGCG GCCCGGTGGA TTTCAAATCG
AGCGACGGCA ATACGGCGTT CACTAACGGC GAGACTTTTG TCGGTGCACA GGCGTGGGTG
AGTATTTCAG GTAGCTCCAA CGGCGTTTCC AGCGATACCT TGCAAGCCGG CGAAGTGCTC
AATATGGATT TCTACAACTC CAGCCCTGGG TCAAACGGTA CCCCCGGACC CGGTACTGCA
ACGGCGAACG GTATCTACCT CAAGCTCGAC CAGCTCGGTG TTGGCGAGGA TTTCGTGGTG
ATCCTCAAGC TTATCAATCC CGATACGCTG GAAACAACCA CCAGAGCCAT CGTGATCGAT
TACTCGGATA TTTACCTGTC TTCGGAATCG AACCCTTATG GGATTACGTT CGTGGACGAC
AGCGATGGCG TGGTGATCAT TGAAAGCAAT GACTACAACA CCGGCAGCAG CAATTGGGTG
ATCAACGGCG CGCAGTTGCT GGTTTCGACT GAAACCGTGA CCGGCGAGGG CATCGACCTC
AATCGTGATA CTGGAGACAC CGGTGGATCG AGCGGGACAG ATGCATTCGG GGGCGATACC
GTCGACAATG ACGTGATCAA AATTTCCGAT ATTGGCATCA TCTCGACCAC GAGCGACACG
CAGGATGCTT CGCTGGACTT TAGCTTCACC CTCGTGGATG CCGATGGAGA CAACACGGCA
AGCCAGACGC TGAGTGTCAC GATCGAAGGA AGTTCCACCT TCGAAGGTAC GGCCAGCGCC
GAATCCATTA CGGGAGATGG CAGTGCCAAC GTTCTGATCG GCGGTGCCGG CAACGACATC
CTGGAGGGTG GCGGCGGCGC CGACGTCTTC AAATGGAGCT TGACTGATCA AGGTACCGTC
GGAACGCCGG CTGCCGATGT CATCAAGGAC TTCACGCTGG GCGGCGGAGG CGATGTGCTC
GATCTGCGTG ATTTGCTGCA AGGCGAACTG GCTGGAACAG ACGCTGCTTC TGCAACCAGC
CTGAGCCAGT ACCTGCACTT TTCGGAGGTG GGTGGCAAGG CCGTCTTGTC GGTGGACCAT
GACGGAGGAA GCTTCGCGGC GACGCAAACC ATCACGTTCG ACAACATGAG CCTGGATGGT
TTGAAGAGCG GACTGGGTCT CGCCCCTTCT GCAACCGACA CCAATATCAT TCAAAAGCTG
CTGGATAACG GCAACCTGAA CAACACCCCC TGA
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| Protein sequence | MAQFATVAAI TGNGSVLAVD VQGRTRVLKV GDTLQKGETV RTVGDVRVEL LMEDGSLLAV
APAQSIRLDE NVVQSDQRPT AQDSAVTTPA TADAVIQALE RGTDLNQSLE ATAAGLVPGG
GVDGGSSFVQ LLRIAEGVSP LAYEYNFVPP ELQPDIESIP EPVPPTVSVG VTVGVQVGVG
EGGPGLITGE MIQGTVSTAD VIEGSGGGSK AVTFLITLNQ VSTTDVTVTY TIVPGTASNP
ADYFDGAVTG TVTIPAGYIG FFVTENIVGD ILVEGNETFT IVLSNPIGAT LINDTATVTI
IDDDHAPVAV DDSNSLTEDQ ISVSGNVIPN DTDADGQTLS VVGPSITATN AYGTLVIDSA
TGGYTFTLNE ATQAAAQALD DGESINMVFA DVYQVTDGAN LSNLADVSIT ITGTNDGPII
TADPGNEGGN DVVYESGLAI GSDAAAGTEF AFGTFTVSDA DGLDDIQSVT INGVTVAIGS
LVGQSFAGTN GTLTVTAYDA GTGVASYTYE LTSPTTDVDG TETDVFTLTT SDGTATSAPA
AITIEIIDDV PTARADTDSV AEGADTTGNV LTGAGTTSGG AGADTAGADG FGAGAVVGVA
AGSNTAVPVS GGVGGGIAGT YGTLTLNADG SYTYEANPDA VTSNQTDTFV YTIVDGDGDL
STTTLTISVN NVTVTASDTD ALVNEAGLPV VGSDAASNSE IFNGAITPSG GTGPYTYTLT
STANGAYGNL VLNADGTYTY TLDTTFDGAT LNNGVTTEQD KDSFSYTVTD ANGNTTTGTI
LVDIIDDVPV VLDKTDLIYS NSSNPSPGGT GVFDYIIGAD SRTTFSSSDS DFSAITLAGM
VGATAISTPS VTWASEDSNE AVFDVQFSYA ANPLTPGVLT EANGTLTFDK VSGTYELTLD
EPIESFSILT TSGTLSKESY NLVGPSEAQP EIVVSKLAEE FFVRFTGGEE QGGGPVDFKS
SDGNTAFTNG ETFVGAQAWV SISGSSNGVS SDTLQAGEVL NMDFYNSSPG SNGTPGPGTA
TANGIYLKLD QLGVGEDFVV ILKLINPDTL ETTTRAIVID YSDIYLSSES NPYGITFVDD
SDGVVIIESN DYNTGSSNWV INGAQLLVST ETVTGEGIDL NRDTGDTGGS SGTDAFGGDT
VDNDVIKISD IGIISTTSDT QDASLDFSFT LVDADGDNTA SQTLSVTIEG SSTFEGTASA
ESITGDGSAN VLIGGAGNDI LEGGGGADVF KWSLTDQGTV GTPAADVIKD FTLGGGGDVL
DLRDLLQGEL AGTDAASATS LSQYLHFSEV GGKAVLSVDH DGGSFAATQT ITFDNMSLDG
LKSGLGLAPS ATDTNIIQKL LDNGNLNNTP
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