| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0304 |
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| Symbol | |
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| ID | 4011675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 320128 |
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| End bp | 325548 |
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| Gene Length | 5421 bp |
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| Protein Length | 1806 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637939989 |
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| Product | hypothetical protein |
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| Protein accession | YP_547167 |
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| Protein GI | 91786215 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01965] VCBS repeat
[TIGR03661] type 1 secretion C-terminal target domain (VC_A0849 subclass) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAAT TCGCAACCGT CGCCGCCATC ACGGGAAATG GCTCGGTCCT CGCTGTCGAC
GTGCAGGGCA GGACCCGCGT CCTCAAGGTT GGTGACACCC TGCAAAAGGG TGAAACCGTG
CGCACCGTGG GCGACGTCCG GGTCGAGCTC CTGATGGAAG ACGGCAGCCT GCTGGCTGTT
GCGCCCGCGC AAAGCATCCG CCTGGATGAA AACGTGGTCC AGTCCGACCA GCGACCCACG
GCCCAGGACA GCGCGGTCAC CACGCCGGCC ACGGCAGACG CCGTCATCCA GGCGCTCGAA
CGCGGGACCG ATCTGAACCA GTCACTCGAA GCCACCGCGG CCGGTTTGGT CCCCGGCGGC
GGTGTTGACG GCGGCAGCAG CTTTGTGCAG TTGCTGCGCA TCGCCGAGGG TGTGAGCCCG
CTGGCCTACG AGTACAACTT TGTGCCGCCC GAGCTGCAGC CTGATATTGA GTCGATTCCC
GAGCCGGTGC CACCCACGGT CAGCGTCGGC GTTACCGTGG GTGTGCAGGT CGGTGTAGGC
GAGGGCGGCC CGGGCCTGAT CACCGGCGAA ATGATCCAGG GCACAGTCTC GACCGCCGAT
GTGATCGAGG GCTCCGGCGG CGGCAGCAAG GCCGTCACCT TCCTGATTAC CCTGAACCAG
GTCTCCACGA CCGATGTGAC GGTCACCTAC ACCATCGTGC CCGGCACCGC GAGCAATCCG
GCGGACTATT TCGACGGTGC GGTCACCGGC ACGGTTACCA TCCCGGCCGG CTATATCGGC
TTCTTCGTGA CTGAAAACAT TGTGGGAGAC ATCCTGGTCG AAGGCAATGA AACCTTCACC
ATTGTCCTGA GCAATCCGAT CGGGGCCACC CTGATCAACG ACACGGCGAC CGTGACCATC
ATTGACGATG ACCACGCACC GGTGGCGGTC GACGACAGCA ACAGCCTGAC TGAAGACCAG
ATCTCCGTCT CGGGCAACGT GATCCCCAAC GATACCGATG CAGACGGCCA GACCCTGTCC
GTGGTCGGCC CCTCGATCAC GGCGACCAAT GCCTACGGCA CGCTGGTCAT CGACAGCGCG
ACGGGCGGCT ACACCTTCAC GCTGAACGAA GCCACCCAGG CAGCGGCGCA GGCACTGGAC
GACGGCGAAT CCATCAACAT GGTGTTTGCC GATGTCTACC AGGTGACCGA TGGCGCCAAC
CTGAGCAATC TGGCCGATGT GAGCATCACC ATCACCGGCA CCAATGACGG GCCAATTATC
ACCGCCGATC CCGGCAATGA AGGCGGCAAC GACGTGGTGT ACGAGTCTGG TCTGGCAATC
GGTTCCGATG CGGCGGCCGG CACCGAATTT GCATTCGGCA CCTTCACGGT ATCGGATGCG
GACGGCCTGG ACGACATCCA GAGCGTCACC ATCAACGGCG TCACCGTCGC GATTGGCAGC
CTGGTGGGCC AGAGCTTCGC GGGTACGAAC GGCACCCTGA CGGTCACCGC CTACGATGCC
GGCACCGGCG TCGCCAGCTA CACCTATGAG CTGACCAGCC CGACCACGGA TGTGGATGGC
ACGGAGACCG ATGTCTTCAC GCTGACCACG TCAGACGGCA CGGCCACTTC GGCACCGGCC
GCGATCACCA TTGAGATCAT TGACGACGTG CCGACGGCAC GTGCGGACAC GGACAGCGTG
GCCGAGGGCG CGGATACGAC CGGCAACGTG CTGACGGGCG CGGGCACCAC GAGCGGGGGC
GCTGGCGCCG ACACGGCCGG TGCCGATGGC TTTGGTGCCG GCGCGGTGGT GGGCGTGGCG
GCGGGCAGCA ACACAGCCGT GCCGGTGTCC GGTGGTGTGG GCGGAGGCAT TGCCGGCACC
TACGGCACGC TGACGCTGAA CGCGGACGGC AGCTACACCT ACGAGGCCAA TCCTGATGCG
GTGACGAGCA ACCAGACCGA CACGTTCGTG TACACCATCG TGGATGGCGA CGGCGACCTG
TCGACCACGA CGCTGACGAT CAGCGTGAAC AACGTCACGG TGACGGCAAG CGACACGGAC
GCGCTGGTCA ACGAAGCGGG CCTGCCCGTG GTGGGCAGCG ATGCGGCGAG CAACAGCGAA
ATCTTCAACG GCGCGATCAC CCCGTCGGGC GGCACGGGCC CGTACACCTA CACGCTGACC
AGCACCGCCA ACGGTGCCTA TGGCAACCTG GTGCTCAATG CCGACGGCAC TTACACCTAC
ACGCTGGACA CGACCTTCGA CGGTGCGACG CTCAACAACG GCGTCACCAC CGAGCAGGAC
AAGGACAGCT TCAGCTACAC GGTGACGGAC GCCAACGGCA ACACCACCAC CGGCACCATC
CTGGTGGACA TCATTGACGA CGTGCCGACG GCACGTGCGG ACACGGACAG CGTGAACGAG
GGCGCGGATA CGACCGGCAA CGTGCTGACG GGCGCGGGCA CCACGAGCGG GGGCGCTGGC
GCCGACACGG CCGGTGCCGA TGGCTTTGGT GCCGGCGCGG TGGTGGGCGT GGCGGCGGGC
AGCAACACAG CCGTGCCGGT GTCCGGTGGT GTGGGCGGAG GCATTGCCGG CACCTACGGC
ACGCTGACGC TGAACGCGGA CGGCAGCTAC ACCTACGAGG CCAATCCTGA TGCGGTGACG
AGCAACCAGA CCGACACGTT CGTGTACACC ATCGTGGATG GCGACGGCGA CCTGTCGACC
ACGACGCTGA CGATCAGCGT GAACAACGTC ACGGTGACGG CAAGCGACAC GGACGCGCTG
GTCAACGAAG CGGGCCTGCC CGTGGTGGGC AGCGATGCGG CGAGCAACAG CGAAATCTTC
AACGGCGCGA TCACCCCGTC GGGCGGCACG GGCCCGTACA CCTACACGCT GACCAGCACC
GCCAACGGTG CCTACGGCAA CCTGGTGCTC AATGCCGACG GCACCTACAC CTACACGCTG
GACACGACCT TCGACGGTGC GACGCTCAAC AACGGCGTCA CCACCGAGCA GGACAAGGAC
AGCTTCAGCT ACACGGTGAC GGACGCCAAC GGCAACAGCA CCACCGGCAC CATCCTGGTG
GACATCATTG ACGACGTGCC GACGGCGCGT GCGGACACGG ACAGCGTGAA CGAGGGCGCG
GATACGACCG GCAACGTGCT GACGGGCGCG GGCACCACGA GCGGGGGCGC TGGCGCCGAC
ACGGCCGGTG CCGATGGCTT TGGTGCCGGC GCGGTGGTGG GCGTGGCGGC GGGCAGCAAC
ACAGCCGTGC CGGTGTCCGG TGGTGTGGGC GGAGGCATTG CCGGCACCTA CGGCACGCTG
ACGCTGAACG CGGACGGCAG CTACACCTAC GAGGCCAATC CTGATGCGGT GACGAGCAAC
CAGACCGACA CGTTCGTGTA CACCATCGTG GATGGCGACG GCGACCTGTC GACCACGACG
CTGACGATCA GCGTGAACAA CGTCACGGTG ACGGCAAGCG ACACGGACGC GCTGGTCAAC
GAAGCGGGCC TGCCCGTGGT GGGCAGCGAT GCGGCGAGCA ACAGCGAAAT CTTCAACGGC
GCGATCACCC CGTCGGGCGG CACGGGCCCG TACACCTACA CGCTGACCAG CACCGCCAAC
GGTGCCTATG GCAACCTGGT GCTCAATGCC GACGGCACTT ACACCTACAC GCTGGACACG
ACCTTCGACG GTGCGACGCT CAACAACGGC GTCACCACCG AGCAGGACAA GGACAGCTTC
AGCTACACGG TGACGGACGC CAACGGCAAC ACCACCACCG GCACCATCCT GGTGGACATC
ATTGACGATG TGCCCGTTGT TCTGGATAAG ACGGATCTTA TTTATTCGAA TTCCAGCAAT
CCGTCTCCTG GTGGCACGGG CGTTTTCGAC TACATCATCG GCGCGGACAG CCGGACGACG
TTCAGTTCAT CCGACTCCGA TTTTTCGGCA ATCACGCTGG CCGGCATGGT CGGCGCGACG
GCAATTTCCA CACCATCCGT GACCTGGGCT TCCGAAGATT CGAACGAGGC GGTCTTCGAT
GTGCAGTTCT CCTATGCAGC GAATCCGCTC ACCCCTGGCG TACTGACAGA GGCCAATGGG
ACGCTCACCT TCGACAAGGT AAGCGGTACC TATGAGCTAA CGCTGGATGA GCCGATCGAA
AGCTTCAGCA TTCTGACCAC CAGCGGTACG CTTTCCAAAG AAAGCTACAA CCTGGTTGGG
CCGTCGGAAG CTCAGCCGGA AATCGTGGTG TCCAAGCTGG CAGAAGAGTT CTTTGTGCGG
TTTACCGGTG GCGAAGAGCA GGGCGGCGGC CCGGTGGATT TCAAATCGAG CGACGGCAAT
ACGGCGTTCA CTAACGGCGA GACTTTTGTC GGTGCACAGG CGTGGGTGAG TATTTCAGGT
AGCTCCAACG GCGTTTCCAG CGATACCTTG CAAGCCGGCG AAGTGCTCAA TATGGATTTC
TACAACTCCA GCCCTGGGTC AAACGGTACC CCCGGACCCG GTACTGCAAC GGCGAACGGT
ATCTATCTCA AGCTCGATCA GCTCGGTGCT GGCGAGGATT TCGTTGTGAT CCTCAAGCTC
GTCGATGCCA GCGACCCGAC AATTACAACA ACCAGAGCTA TCGTGATCGA TTATGCTGAT
ATTTACCTGT CTTCGGAATC GAACCCTTAT GGGATTACGT TTGTGGACGA CAGCGATGGC
GTGGTGATCA TTGAAAGCAA TGACTACAAC AGCGGTGGCA GCAATTGGGT GATCAACGGC
GTGCAACTGC TGGTTTCGAC CGAAACCGTG ACCGGCTCGG GCATCGACCT CAATCGTGCT
ACGGGTGATG CCGGCGGATC GAGCGGGACA GATGTATTCG GGAGCGATAC CGTCGACAAT
GACGTGATCA AAATTTCCGA TATTGGCATC ATCTCGACCA CGAGCGACAC GCAGGATGCT
TCGCTGGACT TTAGCTTCAC CCTCGTGGAT GCCGATGGAG ACAACACGGC AAGCCAGACG
CTGAGTGTCA CGATCGAAGG AAGTTCCACC TTCGAAGGTA CGGCCAGCGC CGAATCCATT
ACGGGAGATG GCAGTGCCAA CGTTCTGATC GGCGGTGCCG GCAACGACAT CCTGGAGGGT
GGCGGCGGCG CCGACGTCTT CAAATGGAGC TTGACTGATC AAGGTACCGT CGGAACGCCG
GCTGCCGATG TCGTGACAGA TTTTGCTGCA GGAGACACGT TGAATCTTCT GGATCTGCTG
CCGGGCGCGC CTGGAACGGA TCTAACGCAG TATCTGGATG TTACGCAAGA GGCTGGCGGG
ATCATGATCC ATGTGACGGA TGGCACCGGA GCTGCATCGA CGAACGATGT GCAGACAATT
CTTCTTGCGA GCTACACCAC GACAGATACG GTGACGGACA TACTGAACGA GTTGAAAGCG
ACCCAACAGT ACACAGGGTA A
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| Protein sequence | MAQFATVAAI TGNGSVLAVD VQGRTRVLKV GDTLQKGETV RTVGDVRVEL LMEDGSLLAV
APAQSIRLDE NVVQSDQRPT AQDSAVTTPA TADAVIQALE RGTDLNQSLE ATAAGLVPGG
GVDGGSSFVQ LLRIAEGVSP LAYEYNFVPP ELQPDIESIP EPVPPTVSVG VTVGVQVGVG
EGGPGLITGE MIQGTVSTAD VIEGSGGGSK AVTFLITLNQ VSTTDVTVTY TIVPGTASNP
ADYFDGAVTG TVTIPAGYIG FFVTENIVGD ILVEGNETFT IVLSNPIGAT LINDTATVTI
IDDDHAPVAV DDSNSLTEDQ ISVSGNVIPN DTDADGQTLS VVGPSITATN AYGTLVIDSA
TGGYTFTLNE ATQAAAQALD DGESINMVFA DVYQVTDGAN LSNLADVSIT ITGTNDGPII
TADPGNEGGN DVVYESGLAI GSDAAAGTEF AFGTFTVSDA DGLDDIQSVT INGVTVAIGS
LVGQSFAGTN GTLTVTAYDA GTGVASYTYE LTSPTTDVDG TETDVFTLTT SDGTATSAPA
AITIEIIDDV PTARADTDSV AEGADTTGNV LTGAGTTSGG AGADTAGADG FGAGAVVGVA
AGSNTAVPVS GGVGGGIAGT YGTLTLNADG SYTYEANPDA VTSNQTDTFV YTIVDGDGDL
STTTLTISVN NVTVTASDTD ALVNEAGLPV VGSDAASNSE IFNGAITPSG GTGPYTYTLT
STANGAYGNL VLNADGTYTY TLDTTFDGAT LNNGVTTEQD KDSFSYTVTD ANGNTTTGTI
LVDIIDDVPT ARADTDSVNE GADTTGNVLT GAGTTSGGAG ADTAGADGFG AGAVVGVAAG
SNTAVPVSGG VGGGIAGTYG TLTLNADGSY TYEANPDAVT SNQTDTFVYT IVDGDGDLST
TTLTISVNNV TVTASDTDAL VNEAGLPVVG SDAASNSEIF NGAITPSGGT GPYTYTLTST
ANGAYGNLVL NADGTYTYTL DTTFDGATLN NGVTTEQDKD SFSYTVTDAN GNSTTGTILV
DIIDDVPTAR ADTDSVNEGA DTTGNVLTGA GTTSGGAGAD TAGADGFGAG AVVGVAAGSN
TAVPVSGGVG GGIAGTYGTL TLNADGSYTY EANPDAVTSN QTDTFVYTIV DGDGDLSTTT
LTISVNNVTV TASDTDALVN EAGLPVVGSD AASNSEIFNG AITPSGGTGP YTYTLTSTAN
GAYGNLVLNA DGTYTYTLDT TFDGATLNNG VTTEQDKDSF SYTVTDANGN TTTGTILVDI
IDDVPVVLDK TDLIYSNSSN PSPGGTGVFD YIIGADSRTT FSSSDSDFSA ITLAGMVGAT
AISTPSVTWA SEDSNEAVFD VQFSYAANPL TPGVLTEANG TLTFDKVSGT YELTLDEPIE
SFSILTTSGT LSKESYNLVG PSEAQPEIVV SKLAEEFFVR FTGGEEQGGG PVDFKSSDGN
TAFTNGETFV GAQAWVSISG SSNGVSSDTL QAGEVLNMDF YNSSPGSNGT PGPGTATANG
IYLKLDQLGA GEDFVVILKL VDASDPTITT TRAIVIDYAD IYLSSESNPY GITFVDDSDG
VVIIESNDYN SGGSNWVING VQLLVSTETV TGSGIDLNRA TGDAGGSSGT DVFGSDTVDN
DVIKISDIGI ISTTSDTQDA SLDFSFTLVD ADGDNTASQT LSVTIEGSST FEGTASAESI
TGDGSANVLI GGAGNDILEG GGGADVFKWS LTDQGTVGTP AADVVTDFAA GDTLNLLDLL
PGAPGTDLTQ YLDVTQEAGG IMIHVTDGTG AASTNDVQTI LLASYTTTDT VTDILNELKA
TQQYTG
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