| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0301 |
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| Symbol | |
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| ID | 4011672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 317297 |
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| End bp | 318712 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637939986 |
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| Product | Type I secretion membrane fusion protein, HlyD |
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| Protein accession | YP_547164 |
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| Protein GI | 91786212 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTGGC TTAGCGAAAA AGCTTTTGAA CGTCTGGGCA GCTGGGTCAA CCGGTCGGCA
GAATCCAGCC CGAGGGCTTT CGATCCGCTG GTCAAGCGGC TCACGCCGGT GGAGGAGCAG
GACTCGCTCG ACTGGGCCGG TGATGCCGAC TGGGCCCGCC TGCAGCAGGA ACCCCTGCGC
GCCAGGCGGC TGCTGCGCCT GGCCGCCGGC GTCCTGGTTC TGCTGGTGAT CTGGGCCTAC
TTTGCCGAGC TCGATGAAGT CACCCGGGGT GAGGCCCGCG TGGTGCCGAC CAGCCAGGTG
CAGATCATCC AGAGTGTTGA CGGCGGTGTC GTGGAGGCCC TGCTCGTCAG GGAGGGGCAG
ATCGTCGACG CCGGCCAGCT GCTGATGCGC GTGGACCCGA CACGCTTTGT CTCCACCATG
CAGGAAAGCC GCGCCGCCCA GCTGTCTTAC CAGGCCAAGG CTTTGCGGCT GGAGGCACTG
ACGCGGGGCA CGCCGTTCAA TCCGCCTGCG GACCTGGTGC GTGAAGCGCC CGATGTCGTT
GCGCAGGAGT TGCGCCTGTA TGAATCACGC CGGGCCGAAA TCGGTGCCCA GCTTTACATA
TCGCAGGCCC AGTTGTCCCA GCGCCAGCAG GAGCTCAATG AAGTCCTTGC CCGCCGTGAC
CAGGCCGAAC GCAGCCTGGA ACTGATGAAC AGGGAGCTCA ACGCCACGCG CCCCATGATC
GCCACCGGCG CCGTCTCCGA GGTAGAGGTG TTGCGCCTCG AGCGCGACGT CGCCCGCTTG
CGCGGCGACC GGGAGCAGGC CACGGCGCAA ATCTCGCGCG TGCAGTCCTC CATCCTGGAG
GCCACGCGCA AGATCGAGGA AGTGCAGCTC ACCAGCCGCA ACCAGATGAG CGGCGAGCTG
TCAGAGACCA TGAACAAGCT GGCCACCCTG TCGCAAGGGG GTCGGGCGCT TGAAGACAAA
GTCAAGCATG CCGATATCAA GTCGCCCGTG CGCGGCACCG TGAAGCGCCT GCTGGTCAAT
ACCATGGGGG CGGTGGTGCA ACCCGGCAAG GAAGTGGTTG AGGTGGTCCC GCTGGACGAC
GCGCTGATCC TGGAGGTACA AATCACCCCC AAGGACATTG CCTTCCTGCG TCCCGGGCAG
CAGGCCATGG TGAAGTTCAG CGCCTATGAC TTTTCCATTT ACGGCGGACT GGAGGCGGAT
GTGATCAACA TTGGCGCAGA CTCGGTCATC GACGAAAAAG GCAATGCCTT CTATCATGTG
CGGGTGCGCA CACACAAACC CAGCCTGGGG CCCAACCTCC CCATCATTCC GGGCATGGTG
GCGCAGGTTG ACATCCTCAC TGGCAAGAAG TCGGTGTTGG CTTATCTGCT CAAACCCGTA
CTGCGGGCCA GAGCCAACGC CCTGACTGAG CGCTGA
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| Protein sequence | MAWLSEKAFE RLGSWVNRSA ESSPRAFDPL VKRLTPVEEQ DSLDWAGDAD WARLQQEPLR
ARRLLRLAAG VLVLLVIWAY FAELDEVTRG EARVVPTSQV QIIQSVDGGV VEALLVREGQ
IVDAGQLLMR VDPTRFVSTM QESRAAQLSY QAKALRLEAL TRGTPFNPPA DLVREAPDVV
AQELRLYESR RAEIGAQLYI SQAQLSQRQQ ELNEVLARRD QAERSLELMN RELNATRPMI
ATGAVSEVEV LRLERDVARL RGDREQATAQ ISRVQSSILE ATRKIEEVQL TSRNQMSGEL
SETMNKLATL SQGGRALEDK VKHADIKSPV RGTVKRLLVN TMGAVVQPGK EVVEVVPLDD
ALILEVQITP KDIAFLRPGQ QAMVKFSAYD FSIYGGLEAD VINIGADSVI DEKGNAFYHV
RVRTHKPSLG PNLPIIPGMV AQVDILTGKK SVLAYLLKPV LRARANALTE R
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