| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0300 |
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| Symbol | |
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| ID | 4011671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 315132 |
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| End bp | 317297 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637939985 |
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| Product | ABC transporter related |
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| Protein accession | YP_547163 |
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| Protein GI | 91786211 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATTG GTCAGATCTC AGGAGATGGA AAATCGGCCG CGGTGCTTTC CGCGCACGAT
GAGTTGCTCG CTTGCTTGCT GATTGTCGCG CGGGCCCATG GCGAAGTTTT GACGCGGGAC
GCCATCATGG CGGGTCTTCC GGCCGAACAC CAGCGCCTGA CGCCCAGCCT GTTTGTCCGC
GCGGCCCGGC GGGCCCGGCT CAGCAGCCAG CTGGTCCGAA AAAACCTCGA CCGGCTCAAG
GATGCCTTGC TGCCCGCCAT TGTGCTGCTG CATGGCCAGA AGGCGTGCGT GCTGCTGGGC
TTCAATGAAG ACCGCAGCGC CGCCCGCATG GTCTATCCCG AGCTCGGCGA TGCGCCCGTG
ATGGTTCCCC TGGCGAATCT GCAGGCAGAT TACACGGGCG TCTCCATCTA TGTACGGCCC
AGCCTGCGCT TTGACGCACG CGCCCCCGAA GTGCGCGCCG GCCGTCATGG CCACTGGTTC
TGGAGCGTCA TGGCCGAGAG CCGGCCGCTC TACCGCGACG TGCTGCTGGC CGCCTTGCTG
GCCAACCTGT TTGCGCTCGG CCTGCCCCTG TTCGTCATGA ATGTGTACGA CCGGGTGGTG
CCCAACCACG CGTTTGAAAC CCTGTGGGTG CTGGCCATCG GGCTGATGCT GATGCTGGTG
AGCGACCTGG TGCTGCGCAC GCTGCGCAGC CGGTTTGTCG ACCTCGCCAG CAGCCGCGCC
GATGTCAAGT TGTCGGCCTT CATCATGGAG CGTGTGCTCG GCATGCGCAT GGAGCAGCGG
CCGGTTTCCG CCGGCTCGTT TGCCTCCAAC CTGCGGGCGT TTGAGTCTGT GCGCGATTTC
ATCGGCTCGG CCACCGTGGT GGCCTTCATT GACCTGCCGT TCGCGCTCAT TTTCATGATC
GTGATTGGCT GGATCTCCTG GCCCATGCTG ATTCCCCTTG GCGTGGGCGC GCTCATCATG
CTGCTGTACG CGCTGGCTGT GCAGGGGCGG ATGCACGAAC TGGCAGAAAC CACCTACCGC
GCGGCCGCGC AGCGCAACGC CACACTGATC GAAGGCCTGG TGGGCTTCGA AACCCTCAAG
GCGCTGGGCG CCGAGTCAGC CATCCAGCAC AAATGGGAAA AAAGCGCGGC GCTGCTGGCG
CGGGTGGGCG CGCAGTTGCG TTTGCTGTCG TCCACCTCCA GCAATACCTC GGCATTTGTG
CAGCAACTCA TCAGCCTGGT CATCGTCATC ATCGGCGTCT ACGTGATTGC CGAGCGCGAG
CTGACCGTCG GTGGCCTGAT TGCCTGCACC ATGCTGGCCT CGCGCGCCAT GGCGCCGGTG
GGGCAGGTGG CGGGCCTGCT GGTCCAGTAC CACACGGCCG CCACCGCGTT GACGTCACTC
AATGAAATGA TGGCGCGCGA CGTGGAGCGC CCCGACGACA CCACCTTCAT CAGCCGTGGC
CACCTCAAGG GAGCCATCGA CTTTCGCGAT GTGAGCTTCA ACTACCCGGG CCAGGATACG
CCGTCACTGC GCAACCTGAC GTTCAGCATC AAGCCGGGGG AAAAGGTGGC CATCCTGGGG
CGCATCGGCT CGGGCAAGAC CACGCTGGAA AAACTCATTC TGGGCCTGTA CCGGCCTACG
GCCGGGGCTG TGTTGGTCGA TGGCGTTGAC CTGCGCCAGC TCGACCCCGC CGAACTGCGG
CGCCAGATTG GCTACGTGCA GCAGGACGTG ATGCTGTTCT ACGGCAGCCT GAGGGACAAC
ATCACCCTGG GCTCCCCGCT GGCAGAAGAT GCCGACATCG TGAAGGCGGC CGAAATCGGC
GGCATCATCG GGCTGGTGAA CCAGCATCCG CAGGGCTTCG ACATGCTGGT CGGCGAGCGC
GGCGAGTCGC TGTCTGGCGG GCAGCGCCAG GGCGTGGCCA TCGCGCGTGC GGTCATCAAC
GACCCCCCCA TCCTGTTGCT GGACGAGCCC ACCTCGTCGA TGGACTACTC CAGCGAAGAA
GACATCAAGC GCCGCCTGAA GGAGTTTTCG GTCGGCAAGA CCGTGCTGCT GATCAGCCAC
CGCACCTCGG TGCTGGAGCT GGCGGATCGC ATCATTGTCA TGGACGGCGG CCGCATCGTC
GCGGACGGAC CCAAGGACCA GGTGGTCACT GCACTGCGCC AGGGGCGCAT TGGAAAGGCT
GCGTGA
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| Protein sequence | MSIGQISGDG KSAAVLSAHD ELLACLLIVA RAHGEVLTRD AIMAGLPAEH QRLTPSLFVR
AARRARLSSQ LVRKNLDRLK DALLPAIVLL HGQKACVLLG FNEDRSAARM VYPELGDAPV
MVPLANLQAD YTGVSIYVRP SLRFDARAPE VRAGRHGHWF WSVMAESRPL YRDVLLAALL
ANLFALGLPL FVMNVYDRVV PNHAFETLWV LAIGLMLMLV SDLVLRTLRS RFVDLASSRA
DVKLSAFIME RVLGMRMEQR PVSAGSFASN LRAFESVRDF IGSATVVAFI DLPFALIFMI
VIGWISWPML IPLGVGALIM LLYALAVQGR MHELAETTYR AAAQRNATLI EGLVGFETLK
ALGAESAIQH KWEKSAALLA RVGAQLRLLS STSSNTSAFV QQLISLVIVI IGVYVIAERE
LTVGGLIACT MLASRAMAPV GQVAGLLVQY HTAATALTSL NEMMARDVER PDDTTFISRG
HLKGAIDFRD VSFNYPGQDT PSLRNLTFSI KPGEKVAILG RIGSGKTTLE KLILGLYRPT
AGAVLVDGVD LRQLDPAELR RQIGYVQQDV MLFYGSLRDN ITLGSPLAED ADIVKAAEIG
GIIGLVNQHP QGFDMLVGER GESLSGGQRQ GVAIARAVIN DPPILLLDEP TSSMDYSSEE
DIKRRLKEFS VGKTVLLISH RTSVLELADR IIVMDGGRIV ADGPKDQVVT ALRQGRIGKA
A
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