| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0262 |
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| Symbol | rpsC |
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| ID | 4011708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 282218 |
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| End bp | 283123 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637939946 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_547125 |
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| Protein GI | 91786173 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.155433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAAA AAATCAACCC AACCGGGTTT CGCCTCGCAG TTAGCCGCAA CTGGGCCAGC
CGCTGGTACG CAAGCAACCG TGATTTTGCC GGCATGCTGG CAGAAGACAT CAAGGTGCGC
GAGTACCTCA AGGCCAAGCT GAAGAACGCC GCGGTTTCGC GCGTTCTGAT CGAGCGCCCC
GCCAAGAATG CCCGCATCAC GATTTTCTCG GCACGTCCGG GCGTCGTGAT CGGCAAAAAA
GGCGAGGACA TCGAGAACCT CAAGAAAGAA CTGAGCCGCC AGCTGGGCGT GCCGGTCGCC
GTGAACATTG AAGAAGTCCG CAAGCCTGAA ATTGATGCCA AGCTCATCGC TGACAGCATC
ACGCAACAGC TTGAAAAACG CATCATGTTC CGCCGTGCGA TGAAGCGCGC CATGCAAAAC
GCCATGCGTC TGGGTGCCCT GGGCATCAAG ATCATGTCGT CGGGCCGCCT CAATGGCATT
GAAATCGCCC GTTGCGAGTG GTACCGCGAA GGTCGCGTGC CGCTTCACAC CCTGCGCGCC
GACATCGACT ACGGCACCTC TGAAGCCAAG ACCACTTATG GTGTGATCGG CGTCAAGGTC
TGGGTCTACA AAGGCGACAC GCTGGGCCGT GGCGAATCAC CCGGCGCCAA ACTGGATGCC
GCTCCTTCTG ACGAAGAGCG CAAGCCTCGC GGCCCGCGTC GTGACGCCCG TCCTGGTTCT
GACCGTCCCG CTCCACGTGG TGCCCGTGCG CCGCGCGCAC CGGCCGGCGG CACCAATACG
GCGCCCGCCG ATGGCAGCGA CAAACCGGCC GAAGCTACCC CTGGTAGCGA CGCCCCGAAA
ACCACCGTTA AGCGCGTACG CAAAGCCGCG CCAGCTGCAG CAGCTGACGG TACCAAGACC
GAGTAA
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| Protein sequence | MGQKINPTGF RLAVSRNWAS RWYASNRDFA GMLAEDIKVR EYLKAKLKNA AVSRVLIERP
AKNARITIFS ARPGVVIGKK GEDIENLKKE LSRQLGVPVA VNIEEVRKPE IDAKLIADSI
TQQLEKRIMF RRAMKRAMQN AMRLGALGIK IMSSGRLNGI EIARCEWYRE GRVPLHTLRA
DIDYGTSEAK TTYGVIGVKV WVYKGDTLGR GESPGAKLDA APSDEERKPR GPRRDARPGS
DRPAPRGARA PRAPAGGTNT APADGSDKPA EATPGSDAPK TTVKRVRKAA PAAAADGTKT
E
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