| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0249 |
|---|
| Symbol | |
|---|
| ID | 4011927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 271596 |
|---|
| End bp | 272255 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637939933 |
|---|
| Product | putative transmembrane protein |
|---|
| Protein accession | YP_547112 |
|---|
| Protein GI | 91786160 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2945] Predicted hydrolase of the alpha/beta superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00045708 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATTCCC ACACCCGCAA ATCAAGCATC GAGGGTCCGG CTGGCGCCCT GGAAATTGCG
CTGGACGCAC CCGCCGGTAT TTCCCGGGGC ATGGCCATCA TTGCCCATCC GCACCCGCTG
TTCGGCGGCA CGATGGACAA CAAGGTGGTG CAGACCCTGG CGCGAGCTTT TCTTCACTGC
GGCTGGACAG CCGTGCGCTT CAACTTCCGG GGCGTGGGCG GCAGCGCCGG CAGCCATGAC
GAGGGCCGGG GCGAGCTCGA CGACCTGCTG GCCGTCGTGC AGCATGTGTC GCCGGTGGCG
GAGGGTGATG CGGGTGCGAG CGCGGGCGCG CTGGCACTGG CCGGGTTTTC CTTTGGCGCT
TTTGTCACCA CGCATGCTTT TGCCCGCCTC AACCCCGTTC GACCTGTTGA AAAGCTCGTG
CTGGTTGGCA CCAGCGTCAG CCGGGCGCCC GCTGCACCGA TTGATGCGGC CGCGCACCTG
AAGACCCTGG TGGTGCATGG CGAGCAGGAC GACACGGTGC TGCTGCCGGC CGTGCTCGAT
TGGGCCCGGC CGCAGGCACT TCCTGTTACG GTTGTGCCCG GAGGCGGTCA TTTCTTTCAT
GGACAATTGC CGCTGCTGAA GAATCTGGTG ATCCGCCACC TGTCGTCGCC CCCGATCTGA
|
|---|
| Protein sequence | MNSHTRKSSI EGPAGALEIA LDAPAGISRG MAIIAHPHPL FGGTMDNKVV QTLARAFLHC
GWTAVRFNFR GVGGSAGSHD EGRGELDDLL AVVQHVSPVA EGDAGASAGA LALAGFSFGA
FVTTHAFARL NPVRPVEKLV LVGTSVSRAP AAPIDAAAHL KTLVVHGEQD DTVLLPAVLD
WARPQALPVT VVPGGGHFFH GQLPLLKNLV IRHLSSPPI
|
|---|
| |