| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0235 |
|---|
| Symbol | |
|---|
| ID | 4011913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 257516 |
|---|
| End bp | 258895 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637939919 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_547098 |
|---|
| Protein GI | 91786146 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG4452] Inner membrane protein involved in colicin E2 resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAA AATTCGCGGC ACTGGCCCTG GTGCTGATAC TGCTGGTCCT CGCTCTGCTG
AAAATCAGCG ACGTGGTGCA GGACCGCCAG AATCACCGGC AGATCGCCAT CCAGAGCGTG
GCCCAAAGCC TGGCCGGCCC ACAGACGCTG ACGGGTCCGC TCATCCACAT GGCCTGCACC
GAGGAATGGG AGGTCAGGAA TTCCGACAGG CAGGTGCACA GCGAGCGGCG CGAATTCCTG
CTGGTTGCTG CGCCGGCTTC GCTCACCCTC AAGGGCAGCA GCAAGCTGGA GCCGCGCGCC
CGCGGGCTGC ATGCGACGCA GGTGTTCAGC CTGAAGGCCG ACCTGGTGGC CGAATGGACC
GACACGGAGG CGCTCAAACC TGTCGCTGAA CATGCAGGCT CGCGCATGAA TTGCGGCCAA
CCACTGCTGA TGCTGGCGGT GTCCGATTCG CGCGGCATCC GCCATGCCAG CGTGAAGGTC
GGCGACCAGG TGTTGGCACT CAAGCCGGGC ACGTTTTACG GCAGCTACCC GCGCGGCGTG
CATGCACCGC TGCCGCCGGC CATGGTGCGC TTCCTGCCGC TGCAGGTACA GCTCGGACTG
GAACTGGTGG GCACCGAAAG CATTTCGGTG GTGCCACTGG GTGGCGATAC CCGGATGCAG
CTCACGTCCA ACTGGCCGCA CCCGAGTTTC GGCGGCCAAT TTTTGCCGGT GGACCGCAAG
ATCACACCGC AAGGGTTCGA GGCCAACTGG CGCGTCAGCT CGCTGGCAAG CACGGCGCAG
CAGGACGTCG CGCAAAAGGA TGCGGCCAGG CGCAAGGGGG CCTGCCCGTC TTACGGCGAT
GGTTCGGCCC ACGGCTCCTG CGTGGAGGCC TTTAGCGTGA CTTTTGTCGA TCCGTCCAAT
ACCTACGCGC TCAGTGACCG GGCCACCAAA TACGGTCTGC TCTTCATTGG CCTTACTTTT
CTGGCGGTGG GGCTGTTTGA GTTCATGAAA TCACTGCGCG TGCATCCCAT CCAGTATTTG
CTGGTCGGTG CGGCAATGAG CATGTTCTTT CTGCTGCTGG TGAGCCTGTC CGAGCACATG
CCGTTCGAAA GCGCCTATGT GGTTGCCTCT GCGGCCTGCG TGCTGCTGCT GACCTATTAC
GCCAGCCACA TGCTGGGCCG CTGGTCGCGC GGCCTGCCTT TTGGCCTGGG TATCGCCATG
CTTTACGGCA TGCTGTTTGT GTTGCTGAGG ATGGAGCAGA CCGCCTTGGT GCTGGGCGCC
GTGGCATTGT TCGCCGTGCT GGCTGCGATC ATGATGCTGA CCCGCCGGGT TGACTGGTAC
GCACGCTTTA CGCAGGCGGG GCACGTCGGG CAGGCGGAAG CTGCAAAGGT GGCCGGCTGA
|
|---|
| Protein sequence | MKQKFAALAL VLILLVLALL KISDVVQDRQ NHRQIAIQSV AQSLAGPQTL TGPLIHMACT
EEWEVRNSDR QVHSERREFL LVAAPASLTL KGSSKLEPRA RGLHATQVFS LKADLVAEWT
DTEALKPVAE HAGSRMNCGQ PLLMLAVSDS RGIRHASVKV GDQVLALKPG TFYGSYPRGV
HAPLPPAMVR FLPLQVQLGL ELVGTESISV VPLGGDTRMQ LTSNWPHPSF GGQFLPVDRK
ITPQGFEANW RVSSLASTAQ QDVAQKDAAR RKGACPSYGD GSAHGSCVEA FSVTFVDPSN
TYALSDRATK YGLLFIGLTF LAVGLFEFMK SLRVHPIQYL LVGAAMSMFF LLLVSLSEHM
PFESAYVVAS AACVLLLTYY ASHMLGRWSR GLPFGLGIAM LYGMLFVLLR MEQTALVLGA
VALFAVLAAI MMLTRRVDWY ARFTQAGHVG QAEAAKVAG
|
|---|
| |