| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0203 |
|---|
| Symbol | |
|---|
| ID | 4011861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 220867 |
|---|
| End bp | 221805 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637939887 |
|---|
| Product | branched-chain amino acid aminotransferase |
|---|
| Protein accession | YP_547066 |
|---|
| Protein GI | 91786114 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCAG TAGCACCCTC CATGGCAGAC CGCGACGGCA AAATCTGGAT GGACGGCCAG
ATGGTCGACT GGCGCGACGC CAAAATCCAT GTGCTGAGCC ACACCCTGCA TTACGGCTGC
GGCGCGTTTG AAGGCGTGCG GGCCTACAAC ACCGCCAGCG GCACGGCCAT CTTCCGGCTG
GAAGAGCACA CCGAACGCCT TTTCAACAGC GCCAAGATCC TGCGCATGAA GATCCCTTTC
AGCAAGGAAG AGGTCAATGA GGCGCAAAAA GCCGTGGTGC GCGAGAACAA GCTCGAAAGC
TGTTACCTGC GCCCGCTGAC CTGGATCGGC TCGCAGAAAC TGGGCGTGTC GCCCAAGGGC
AACCAGATCC ACCTGATGGT CGCCGCCTGG GCCTGGGGCG CCTACCTGGG CGAAGAGGGC
ATGAAGCGGG GCATCCGCGT CAAGACATCC AGCTACACGC GCCACCACGT CAACATCACC
ATGACGCAGG CCAAGGCGGT CAGCAACTAC ACCAACTCCA TCCTGGCCAA TATGGAAGCG
CTGGACGACG GCTACGACGA GGCACTGCTG CTGGACGCCT CGGGCTTTGT CAGCGAAGGC
GCGGGCGAGA ACGTGTTTGT GATCAAGGGC GGCGTGGTCT ACACGCCCGA CCTGTCGGCC
GGTGCCCTCA ACGGCATCAC CCGCAACACC GTTCTGCACA TCTGCAAGGA CCTGGGCCTG
GAGCTGGTGC AAAAGCGCAT CACGCGCGAT GAGGTCTACA TCAGCGACGA AGCCTTCTTC
ACCGGCACCG CCGCTGAAGT CACGCCCATC CGAGAACTGG ACCGCATCGA GATCGGCGCC
GGCTCACGCG GCCCGATCAC CGAGAAAATC CAGAGCGCCT TCTTTGACAT CGTCAACGGC
CGCAATCCGA AATACGCCCA CTGGCTGGCT AAAGTGTGA
|
|---|
| Protein sequence | MSPVAPSMAD RDGKIWMDGQ MVDWRDAKIH VLSHTLHYGC GAFEGVRAYN TASGTAIFRL
EEHTERLFNS AKILRMKIPF SKEEVNEAQK AVVRENKLES CYLRPLTWIG SQKLGVSPKG
NQIHLMVAAW AWGAYLGEEG MKRGIRVKTS SYTRHHVNIT MTQAKAVSNY TNSILANMEA
LDDGYDEALL LDASGFVSEG AGENVFVIKG GVVYTPDLSA GALNGITRNT VLHICKDLGL
ELVQKRITRD EVYISDEAFF TGTAAEVTPI RELDRIEIGA GSRGPITEKI QSAFFDIVNG
RNPKYAHWLA KV
|
|---|
| |