Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0200 |
Symbol | |
ID | 4011858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 217927 |
End bp | 219324 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637939884 |
Product | DNA repair protein RadA |
Protein accession | YP_547063 |
Protein GI | 91786111 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAG AAAAAACGAT TTACACCTGC ACCGAATGCG GCGGCACCAG CCCCAAGTGG CTGGGCAAGT GCCCGCACTG CACTGCCTGG AACACGCTGA TCGAGTCGGT CGCCGAAAAC AGCTCACCTG TCAAAAACCG TTTTGCATCC CTGGCCAAGG CTTCCGAGGT GACCACCCTC TCCGACATTG AGGCCACCGA CATGGCGCGC ACACCCACGG GCCATGAGGA GCTGGACCGC GTGCTGGGCG GCGGCATTGT GGACGGCGGG GTGGTGCTGA TCGGCGGCGA CCCCGGCATC GGCAAGTCCA CGCTGCTGCT GCAGGCGCTG GACTCCCTGC AACGCGCCGG CCTGAACACG CTGTATGTGA CGGGCGAGGA AAGCGGGGCG CAGGTTGCGC TGCGCTCGCG CCGGCTGGGG CTGGACGGCT CGCAGGTCAA GGTGCTGGCG GAGATTCAGC TGGAGAAAAT CCTCGCCACG CTGGAGGCGA CCCGGCCGGC GATTGCCGTC ATTGACTCGA TCCAGACGGT GTACTCCGAC CAGCTCACCT CGGCGCCCGG TTCGGTGGCG CAGGTGCGCG AATGCGCGGC CCACCTGACG CGCTACGCCA AAGCCAGCGG ACAATCTGAC GGTGTTGCCC GTGGCCGGGC AACGTGCATC GTGCTGGTCG GCCATGTCAC CAAAGAGGGC GCGTTGGCCG GCCCGCGCGT GCTGGAGCAC ATGGTCGACA CCGTGCTGTA CTTCGAAGGC GACACGCATT CGAGCTTTCG CCTGGTGCGC GCCATCAAGA ACCGCTTCGG CGCCGTCAAT GAAATCGGCG TGTTTGCCAT GACGGAGAAG GGCCTCAAGG GCGTGACCAA CCCGAGCGCG ATTTTCCTGT CCCAGCACAG TGAGCCGGTG CCCGGCAGCT GCGTGCTGGT CACGCTGGAA GGCACACGCC CGATGCTGGT CGAGATCCAG GCGCTGGTCG ACAACGGCGG CCCCAGCCCG CGCCGACTCT CGGTTGGCCT GGACCGTGAC CGGCTGGCCA TGCTGCTGGC CGTGCTGCAC CGCCATGCCG GCGTGGCCTG CATGGACCAG GACGTGTTCG TCAATGCGGT AGGCGGCGTG CGCATCAGCG AGCCGGCCGC CGACCTGAGC GTGATGCTGG CCATCACCTC CAGCCTGCGC GGCAAACCGC TGCCCAAGGG CTTCATTGCT TTTGGCGAGG TGGGACTGGC CGGCGAGGTG CGCCCCGCGC CGCGCGGGCA GGAGCGCCTG AAGGAAGCGG CCAAGCTGGG GTTTAGCGTG GCGGTGGTGC CCAAGGCCAA TGCGCCGAGA AAGCCGATTG AAGGGCTGAT CATCCATGCC GTGGAGCGGG TGGAGCAGGC CATGGAAGTG GTGCGCAGTT TGAATTGA
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Protein sequence | MAKEKTIYTC TECGGTSPKW LGKCPHCTAW NTLIESVAEN SSPVKNRFAS LAKASEVTTL SDIEATDMAR TPTGHEELDR VLGGGIVDGG VVLIGGDPGI GKSTLLLQAL DSLQRAGLNT LYVTGEESGA QVALRSRRLG LDGSQVKVLA EIQLEKILAT LEATRPAIAV IDSIQTVYSD QLTSAPGSVA QVRECAAHLT RYAKASGQSD GVARGRATCI VLVGHVTKEG ALAGPRVLEH MVDTVLYFEG DTHSSFRLVR AIKNRFGAVN EIGVFAMTEK GLKGVTNPSA IFLSQHSEPV PGSCVLVTLE GTRPMLVEIQ ALVDNGGPSP RRLSVGLDRD RLAMLLAVLH RHAGVACMDQ DVFVNAVGGV RISEPAADLS VMLAITSSLR GKPLPKGFIA FGEVGLAGEV RPAPRGQERL KEAAKLGFSV AVVPKANAPR KPIEGLIIHA VERVEQAMEV VRSLN
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