| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0174 |
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| Symbol | |
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| ID | 4012218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 188631 |
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| End bp | 191465 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637939858 |
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| Product | methionine synthase (B12-dependent) |
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| Protein accession | YP_547037 |
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| Protein GI | 91786085 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.106933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAA TTCAAGATCC CATCGCTGTT CCCCCCATGA AGCTGTCCGG CCTGGAGCCG
GTGGCCATCG GGGAGGGCAC GCTCTTCGTC AACATCGGCG AGCGCACCAA CGTCACCGGT
TCCAAGGCCT TTGCCCGCAT GATTTTGAAC GGCGAGTACG AGCAGGCCCT GGCCGTGGCG
CGCCAGCAGG TGGAGAACGG CGCGCAAATC ATCGACATCA ACATGGATGA GGCCATGCTG
GACAGCCAAG CCGCCATGGT GCGCTTTCTG AACCTGATCG CCGGCGAACC CGACATTGCC
CGCGTGCCCA TCATGATCGA CAGCTCCAAA TGGAGCGTGA TCGAGGCCGG CCTGCGCTGC
ATCCAGGGCA AGGGCATCGT CAACTCGATT TCCATGAAGG AGGGGGTCGA GCCCTTCAAG
CACCAGGCCA AGCTGCTCAA GCGCTATGGC GCGGCTGCCG TGGTGATGGC CTTTGACGAG
CAGGGCCAGG CCGACACCTA CCAGCGCAAG ATCGAGATCT GCGAGCGGGC CTACCGCGTG
CTGGTCGACG AGGTCGGCTT TCCGCCCGAA GACATCATCT TTGACCCCAA CATCTTTGCC
ATTGCCACCG GCATTGAAGA ACACAACAAC TACGCGGTCG ATTTCATCAA CGCCACACGC
TGGATCAAGG CCAACCTGCC GGGTGCCAAG GTGTCGGGTG GTGTGTCCAA CGTGAGTTTC
AGCTTCCGTG GTAACGACCC GGTGCGCGAA GCGATTCACA CGGTATTCCT GTACCACGCG
ATCCAGGCCG GCATGGACAT GGGCATCGTC AACGCCGGCA TGGTGGGCGT GTATGACGAC
CTGGAGCCGA CGCTGCGCGA GCGCGTCGAA GACGTGGTGC TCAATCGCCA GCCGGTCTAC
AAGCCGGGTG AGCCTGAACT CACACCCAGC GAGCGCCTGA TTGAAGTGGC CGAAAGCGCC
AAAAGCGGTG CCAGGGACGA CAGCAAGAAA AACGAGTGGC GAGCGCTGCC GGTGCGCGAG
CGTCTGTCGC ACGCGCTGGT GCTGGGCATG AACGAATTCA TCACCGAAGA CACCGAGGAA
ATGTGGCAGG CCATCAAGGC CGAAGGCGGC CGGCCGCTGC ATGTGATCGA AGGCCCGTTG
ATGGACGGCA TGAACGTGGT GGGCGACCTG TTTGGCCAGG GCAAGATGTT TTTGCCGCAG
GTGGTCAAAA GCGCCCGCGT GATGAAGCAG GCCGTGGCGC ACCTGCTGCC CTACATCGAG
GCCGAAAAGC TGCTGCTCGA AGCCGCGGGC GGCGACGTCA AGACCAAGGG CAAGATCATC
ATTGCCACCG TCAAGGGCGA TGTGCACGAC ATTGGCAAGA ACATCGTGAC CGTCGTTCTT
CAGTGCAACA ATTTTGAGGT GGTCAACATG GGCGTGATGG TGCCCTGCCA CGAAATCCTG
GCGCGCGCCA AGGTCGAAGG CGCCGACATC GTCGGCCTGT CGGGCCTGAT CACGCCGAGC
CTGGAAGAGA TGCAGTACGT AGCAAGCGAG ATGCAGAAGG ACGAGCATTT CCGCATCAAG
AAAATCCCGC TGCTGATTGG CGGCGCCACC ACCAGCCGGG TGCACACGGC GGTGAAGATT
TCCCCCCATT ACGAGGGCCC GGTGGTCTAT GTGCCCGATG CCTCGCGCAG CGTGAGCGTG
GCGCAGAGCC TGCTGTCCGA CCAAGCCGCC AGATACATTG ATGAGCTGAA GGCGGACTAC
GAGAAGGTGC GCACCCAGCA CGCCAACAAG AAGCAGGTGC CGATGTGGCC GCTGGCCAAG
GCGCGTGCCA ACAAAACGCC CCTCGACTGG ACAAGCTACA CGCCGCCCGT GCCCAAATTT
ATCGGCCGCC GCGTGTTTAA AAACTTCGAC CTGGCCGAGC TGGCCCGGCA CATCGACTGG
GGCCCGTTTT TCCAGACCTG GGACCTGGCG GGCCCGTTCC CGGCCATCCT GAAAGACGAG
GTGGTGGGCA CCGAGGCCGT GCGTGTGTAT GCCGACGCAC AGCGCCTGCT CAAGCGCCTG
ATCGAAGGCC GCTGGCTCAC CGCCAGCGGG GTGATCGGCC TGTACCCTGC CAACAGCGTG
GGCGACGACA TCGAGATCTA CACCGACGAG ACCCGCAGCG AGGTGGCCAT GACCTGGTAT
GGCCTGCGCC AGCAAGCCGA GAAGACGGCG GTACCTGGCG ACGACGGAAA GAACCACATG
CGCCCCAGCC GCTGCCTCTC GGACTTTGTG GCGCCCAAGG TGCTTCCCGC CGAAGCCAGG
GCCGTGCGCG CCGGCCACGC CGGCCAGGAA GGCCACAACA CGTTCATGCT GCCGGATTAC
ATCGGTTTGT TCGCAGTCAC CGCTGGCATT GGCGCCGAGA AGAAAGAAAA GTACTTTCTT
GACGACAACG ACGACTACTC GTCCATCATG CTCAAGGCGT TGGCCGACCG GCTGGCCGAA
GCCTTTGCCG AGGCCATGCA CCTGCGCGTG CGCAAGGACC TCTGGGGCTA CGCCGCTGGC
GAGTCGCTCA CCACCGAAGA GCTGATTGCA GAGAAATACC AGGGCATACG CCCCGCGCCC
GGCTACCCGG CCTGCCCGGA CCACAGCGTG AAGAAAGACA TGTTTGCGCT GCTGAAGGCC
GACGAGATCG GGATGGCCCT GACCGAAAGC CTGGCCATGA CGCCGGCGGC CAGTGTCAGC
GGTTTTTACC TGAGCCATCC CGAGAGCACG TATTTCAACG TGGGCAAGAT CGGCGACGAC
CAGCTGCAGG ATCTGGCCCG GCGGCGCGGT GCAAAAGCGG AAGAGTTGCA ACGCTTGCTG
GCGCCCAATT TGTGA
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| Protein sequence | MSEIQDPIAV PPMKLSGLEP VAIGEGTLFV NIGERTNVTG SKAFARMILN GEYEQALAVA
RQQVENGAQI IDINMDEAML DSQAAMVRFL NLIAGEPDIA RVPIMIDSSK WSVIEAGLRC
IQGKGIVNSI SMKEGVEPFK HQAKLLKRYG AAAVVMAFDE QGQADTYQRK IEICERAYRV
LVDEVGFPPE DIIFDPNIFA IATGIEEHNN YAVDFINATR WIKANLPGAK VSGGVSNVSF
SFRGNDPVRE AIHTVFLYHA IQAGMDMGIV NAGMVGVYDD LEPTLRERVE DVVLNRQPVY
KPGEPELTPS ERLIEVAESA KSGARDDSKK NEWRALPVRE RLSHALVLGM NEFITEDTEE
MWQAIKAEGG RPLHVIEGPL MDGMNVVGDL FGQGKMFLPQ VVKSARVMKQ AVAHLLPYIE
AEKLLLEAAG GDVKTKGKII IATVKGDVHD IGKNIVTVVL QCNNFEVVNM GVMVPCHEIL
ARAKVEGADI VGLSGLITPS LEEMQYVASE MQKDEHFRIK KIPLLIGGAT TSRVHTAVKI
SPHYEGPVVY VPDASRSVSV AQSLLSDQAA RYIDELKADY EKVRTQHANK KQVPMWPLAK
ARANKTPLDW TSYTPPVPKF IGRRVFKNFD LAELARHIDW GPFFQTWDLA GPFPAILKDE
VVGTEAVRVY ADAQRLLKRL IEGRWLTASG VIGLYPANSV GDDIEIYTDE TRSEVAMTWY
GLRQQAEKTA VPGDDGKNHM RPSRCLSDFV APKVLPAEAR AVRAGHAGQE GHNTFMLPDY
IGLFAVTAGI GAEKKEKYFL DDNDDYSSIM LKALADRLAE AFAEAMHLRV RKDLWGYAAG
ESLTTEELIA EKYQGIRPAP GYPACPDHSV KKDMFALLKA DEIGMALTES LAMTPAASVS
GFYLSHPEST YFNVGKIGDD QLQDLARRRG AKAEELQRLL APNL
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