Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0151 |
Symbol | |
ID | 4012119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 158058 |
End bp | 162122 |
Gene Length | 4065 bp |
Protein Length | 1354 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637939835 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_547014 |
Protein GI | 91786062 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAGTT GGGGAGGGCT TCGTTTTCGT CTGGTGTGGC TGGCGCTGAT TGCGCTGGTA CCGGTATTTG GCCTGTTTGC CTGTACGGCC GCCAAAAACC AGCAAACGGC GCTTGAGCTG GCGCGGTCCA GGTTGCAGTC CGACGTGCTG CTGGCCGCGG CGCACCAGCA GCGTCTGGTG GATCGGGTCG CGCAGTTGCT CGGCGACATC GCCAGCGGGC CGTCGGTCAA GGACACGCGA AACCGGCTGT GCGTGCAGTA CCTCAAAAAC CTGCAATCGC AGGATGCGGC TTACGCCAAC CTCGGCGTCG TGGGCCTTGA TGGCAAGGTC TCCTGCCATG CGATGGATTC CGGCTTTGAT GTGTATGCGG GCGACCGGCC CTTCTTCCAG CAGGTGCTGG CCGGCCGCAA GTTCTCGGTG GGTGAATACA GCACGGGGCG CGCCAGCGGG CGCCCCGGGA TCAGCTTCGC CGTGCCGGTC TACAGCAGCG AGGGCATGCT CAATGGCGTT GCGTTTGCCG CTTTGGATGT CGGCAAGATG GCGCAGGCCC TGGCAGCAGG CCCGGTTCTT GACGGCGCCC AGCTGCGGCT GATGGACAGG CGCGGCACCA TCGTGGCGAT GCATCCGGCT GGAGCGGGCT TGCAGGGCAC CCCCGAGCGC GATGCCGTGG TGCTGGAAGC CGCACAGGCC CAGCGCTCAG GAATACGCGA AGCGGTGGAT GCGAACGGCG TGGGGCGCGT CTATGCGTAC GCGCCGGTCG GTGGCACGGG GGGTGACGGT TTGTTCCTGG CGATCAGCGC ACCGCGTGAC GTCATTACCG CGGGTCCGCA GAAGACACTC CTCATCAACC TGCTGGCCCT GTTGGGCATG ACGGCTTTTG GCATGGGCTG CGCATGGTGG CTGGGCGGGC GCTCGATTGT CAAACCGGCC GCCGCAATTT TGACAACCGC CAACGAGATT GCCGGCGGCA ACCTGGCGGC GCGCGTCAGG CTCGGCCCGC TGCACCGGGG CGAATTCGGC GAAATCGGTT CATCCTTTAA CCGCATGGCC GAGTCCCTGC AGGCGCGCCA GGACGAAGTA GGTGCTGCAT TGGGCCGGGT GGACAAGGAG CGCGCCTTGC TCGACCTCAT CATTAACAGC ATGAGCGAGG GCGTGGTGGC GGTCGATACC GGGGGACGCT TCCTGCTGTT CAACGACACG GTGGGCAAGC TTTTTTCGGC CGCCGAGTTG GGCTCCCCGC TCGATGAGTG GCGCCGTGAT CACGAATTGC TGGCGCTCGA CGGCGAAACG GTCTACGCCT CTGTGGACCG GCCGCTAACG CAGGCCCTGC GCGGCGCTAC GGTCGATAAC CGGGATGTGC TGTTTCGCAA ACCCGGCTTT GAAGACCGTG TCCTGAGGGT CAGCGCCAGG CCGCTGCGGG ACCACGACAA TCAACTGGTG GGCGCTGTGG CGGTGTTCAA TGACGTCACC GACCTGAAGG CTGCGGAAAG TTTTTTCCGT GGCCAGCGGG AGGTGCTGGC GCTGATAGCC AGCGGCGCCC CCCTGTCGCA GTCGCTCGAA GCCATTGTGC GGCTCATCGA AGGCCGGGTG GCCGGCGGTC TGTGCTCCAT CCTGCTGGTG GAGGGCCAGC AGTTGCACCA TGGGGCTGCG GCCGGCCTGC CGGAGAGCTT TATGCGGCTG ATCGACGGGC TTCCGGTTGG CCAGGGCGCC GGCGCCTGTG GCACCGCTGC TTTCCTGAAG CAAGCGGTGA TTGTTGAAGA CATCGCGACC GATCCCCTGA TGAAGGACTT CCGCGAGGTG GCCAGGACCT ACGGCCTGCA GGCCTGCTGG TCAACGCCGG TGATCTCGGG GGAGGGCGAG GTGCTGGCCA CGTTTGCCGT GTACCACCGG ACGCCCTGCA AGCCGCGGGA CAAGGACCTG GAGCTGCTGG AAACCGGCAT CCGGCTGGCG CGCATCGCCC TGGAACACAC CCGTGCGCAG GCTGCGCTGG TGAGCAGCGA AGCGCGTTTT CGTGAACTGG CGGACAACAT CCAGGATGTG TTTTACAACC GCGACGCCCG CACCGGCCGC ATGTTGTATG TCAGCCCGGG TTATGAGCGG ATCTGGGGGC TTAGCTGCGA GAGCCTCTAC GCCGATCCCA AGTCCTATCG CGGTGCGGTT CTGCCCGAAG ACCGGCCCGT GCTGGAGATG GCTGATGAGC TCACAGCGGC CGGAAAGGTT TGTGATCTCG AGTACCGCAT CATCTCCCCG GATGGCCAGA CGCGCTGGAT ACGCGATAAC GCTTACCCGG TGTTCAATGC CGCAGGTGAG CTCGAGCGCG TGGTGGGCAC GGCACGCGAC ATCACCGACC GCAAGCTCGC CGACCGGGCG CTGGACAGCA CCAACCGTGC GATGCAGATG CTCAGCCGCT CCAGTGTGGC GCTGAACCGG ATCGACGACG AGGCCAGCCT GCTGGCCGAG GTTTGCCGCG TGGCCGTCGA GGTGGGCAGC TACCGCATGG CCTGGGTGGG GTATGCCCGG GACGATGAGG CGCGCAGCAT TGAGCCGATG GCTCATGCCG GCGAAGAGGC CGGCTACCTG GCGATGGTCA ATGTCAGCTG GCAGGAGGAC GATGCGACGG GTCAGGGTCC GGCTGGCCAG GCCATTCGCA GCGGGCAGCC ACAGCAGACC GGGGACATCG CCGCTGCCAG CAACCATTTT TTCTGGCAGG AGGCGGCCCT GCAGCGCGGC TACCGAAGTG CCATCTGCTT GCCCTTGCGC GACGACGGGC GGCGCGGTTT TGGTGTGCTG TGCCTGTATG CCGCAGAGGT GCAGCATTTT GTCGCCGGGG AAGTCAGTCT CTTGCAGGAG CTCGCCGACA ACCTGGCCTT TGGCATTGTC AGCCTGCGCG CCCGGCTGGA GCGTCGCCGC AGCGAGGAGT TGGTGCGCCA GACTGCCGCC AAGATGCGCG AACAGGCTTC GCTGCTTGAC CGGGCGCAGG ACGCCATCAT GGTGCGCAAC CTTGACAGAA CCCTGCGTTA CTGGAACAAG GGCGCGGAGC GGCTGTACGG CTGGACCGCC GAAGAGGTGC TGGGCAAGAC CATGGACGAG TTCATGTACC GCAGCCCGCA AGTGCTCATC AGCGCGATGA ACCGGACTCT GGCCAACCAT GGCGAGTGGA CCGGCGAGCT GGAGCAGGTG GCGCGCGATG GCTCCACCGT GTATATCGAG GCGCGCTGGA CTGTGGTGCG CGATGAGCAC GGCCAGGTCA ACGGCGTGCT GGGCATCAAC ACCGACATCC GCGAGCGCAA GCGGGCGCAT GAAGAAATCC TGCGTCTCAA TACCAGCCTC GAAGAGCGCG TGCAGCAGCG CACCGCGCAG CTGGAGTTTG CCAACAAGCA GCTGGAATCC TTTTCCTATT CGGTCTCGCA TGACCTGCGC ACCCCGCTCA GTGCCATTGA CGGGTTCAGC GATCTGCTCG ACAAGGCGCT GGCCAAAACA GTCAGTGGTC CGCAGGCGGA TCGCAGCCGG CACTACCTGT CGCGCATTCG TGCCGGTGTT TCACAAATGG GCGAACTGAT AGACGCCATG CTGTCACTGG CCCAGGTCTC GCGCGCGAGC CTGCGATGGG AGACGGTGGA CCTCAGCGCC CTCGCTCTGG ACGTGCTGGC CCGCCAACGG GACAGGGAGC CCGGCAGGGT GGCGCAGCTG CAAGTCGATC CGGGCCTGGC GGCTCAGGGC GATCCGCGGC TGCTCCAGCA GGTGCTCGAG AATCTGCTGG GCAATGCCTG GAAATTCAGC GCCGGGACGG CCCGTACCGA GATCACCTTC GGCCAGCAGG CGGGCCCTGG CAGCGAAACG GTTTACTTCG TACGCGACAA CGGCGCGGGT TTTGACATGG CGTATTCCGA AAAACTGTTC GGTGCCTTCC AGCGGCTGCA TTCGCCGTCC GAATTTTCGG GAACCGGCAT CGGCCTGACC ACGGTGCAGC GAATTATTGC GCGCCATGGC GGCAGGGTCT GGGGCGAGGC CGCCCTTGGC CGCGGCGCCA CGTTTTACTT CACGCTGGGC GCTGCGCGAC TTTGA
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Protein sequence | MLSWGGLRFR LVWLALIALV PVFGLFACTA AKNQQTALEL ARSRLQSDVL LAAAHQQRLV DRVAQLLGDI ASGPSVKDTR NRLCVQYLKN LQSQDAAYAN LGVVGLDGKV SCHAMDSGFD VYAGDRPFFQ QVLAGRKFSV GEYSTGRASG RPGISFAVPV YSSEGMLNGV AFAALDVGKM AQALAAGPVL DGAQLRLMDR RGTIVAMHPA GAGLQGTPER DAVVLEAAQA QRSGIREAVD ANGVGRVYAY APVGGTGGDG LFLAISAPRD VITAGPQKTL LINLLALLGM TAFGMGCAWW LGGRSIVKPA AAILTTANEI AGGNLAARVR LGPLHRGEFG EIGSSFNRMA ESLQARQDEV GAALGRVDKE RALLDLIINS MSEGVVAVDT GGRFLLFNDT VGKLFSAAEL GSPLDEWRRD HELLALDGET VYASVDRPLT QALRGATVDN RDVLFRKPGF EDRVLRVSAR PLRDHDNQLV GAVAVFNDVT DLKAAESFFR GQREVLALIA SGAPLSQSLE AIVRLIEGRV AGGLCSILLV EGQQLHHGAA AGLPESFMRL IDGLPVGQGA GACGTAAFLK QAVIVEDIAT DPLMKDFREV ARTYGLQACW STPVISGEGE VLATFAVYHR TPCKPRDKDL ELLETGIRLA RIALEHTRAQ AALVSSEARF RELADNIQDV FYNRDARTGR MLYVSPGYER IWGLSCESLY ADPKSYRGAV LPEDRPVLEM ADELTAAGKV CDLEYRIISP DGQTRWIRDN AYPVFNAAGE LERVVGTARD ITDRKLADRA LDSTNRAMQM LSRSSVALNR IDDEASLLAE VCRVAVEVGS YRMAWVGYAR DDEARSIEPM AHAGEEAGYL AMVNVSWQED DATGQGPAGQ AIRSGQPQQT GDIAAASNHF FWQEAALQRG YRSAICLPLR DDGRRGFGVL CLYAAEVQHF VAGEVSLLQE LADNLAFGIV SLRARLERRR SEELVRQTAA KMREQASLLD RAQDAIMVRN LDRTLRYWNK GAERLYGWTA EEVLGKTMDE FMYRSPQVLI SAMNRTLANH GEWTGELEQV ARDGSTVYIE ARWTVVRDEH GQVNGVLGIN TDIRERKRAH EEILRLNTSL EERVQQRTAQ LEFANKQLES FSYSVSHDLR TPLSAIDGFS DLLDKALAKT VSGPQADRSR HYLSRIRAGV SQMGELIDAM LSLAQVSRAS LRWETVDLSA LALDVLARQR DREPGRVAQL QVDPGLAAQG DPRLLQQVLE NLLGNAWKFS AGTARTEITF GQQAGPGSET VYFVRDNGAG FDMAYSEKLF GAFQRLHSPS EFSGTGIGLT TVQRIIARHG GRVWGEAALG RGATFYFTLG AARL
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