| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0151 |
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| Symbol | |
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| ID | 4012119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 158058 |
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| End bp | 162122 |
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| Gene Length | 4065 bp |
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| Protein Length | 1354 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637939835 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_547014 |
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| Protein GI | 91786062 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGTT GGGGAGGGCT TCGTTTTCGT CTGGTGTGGC TGGCGCTGAT TGCGCTGGTA
CCGGTATTTG GCCTGTTTGC CTGTACGGCC GCCAAAAACC AGCAAACGGC GCTTGAGCTG
GCGCGGTCCA GGTTGCAGTC CGACGTGCTG CTGGCCGCGG CGCACCAGCA GCGTCTGGTG
GATCGGGTCG CGCAGTTGCT CGGCGACATC GCCAGCGGGC CGTCGGTCAA GGACACGCGA
AACCGGCTGT GCGTGCAGTA CCTCAAAAAC CTGCAATCGC AGGATGCGGC TTACGCCAAC
CTCGGCGTCG TGGGCCTTGA TGGCAAGGTC TCCTGCCATG CGATGGATTC CGGCTTTGAT
GTGTATGCGG GCGACCGGCC CTTCTTCCAG CAGGTGCTGG CCGGCCGCAA GTTCTCGGTG
GGTGAATACA GCACGGGGCG CGCCAGCGGG CGCCCCGGGA TCAGCTTCGC CGTGCCGGTC
TACAGCAGCG AGGGCATGCT CAATGGCGTT GCGTTTGCCG CTTTGGATGT CGGCAAGATG
GCGCAGGCCC TGGCAGCAGG CCCGGTTCTT GACGGCGCCC AGCTGCGGCT GATGGACAGG
CGCGGCACCA TCGTGGCGAT GCATCCGGCT GGAGCGGGCT TGCAGGGCAC CCCCGAGCGC
GATGCCGTGG TGCTGGAAGC CGCACAGGCC CAGCGCTCAG GAATACGCGA AGCGGTGGAT
GCGAACGGCG TGGGGCGCGT CTATGCGTAC GCGCCGGTCG GTGGCACGGG GGGTGACGGT
TTGTTCCTGG CGATCAGCGC ACCGCGTGAC GTCATTACCG CGGGTCCGCA GAAGACACTC
CTCATCAACC TGCTGGCCCT GTTGGGCATG ACGGCTTTTG GCATGGGCTG CGCATGGTGG
CTGGGCGGGC GCTCGATTGT CAAACCGGCC GCCGCAATTT TGACAACCGC CAACGAGATT
GCCGGCGGCA ACCTGGCGGC GCGCGTCAGG CTCGGCCCGC TGCACCGGGG CGAATTCGGC
GAAATCGGTT CATCCTTTAA CCGCATGGCC GAGTCCCTGC AGGCGCGCCA GGACGAAGTA
GGTGCTGCAT TGGGCCGGGT GGACAAGGAG CGCGCCTTGC TCGACCTCAT CATTAACAGC
ATGAGCGAGG GCGTGGTGGC GGTCGATACC GGGGGACGCT TCCTGCTGTT CAACGACACG
GTGGGCAAGC TTTTTTCGGC CGCCGAGTTG GGCTCCCCGC TCGATGAGTG GCGCCGTGAT
CACGAATTGC TGGCGCTCGA CGGCGAAACG GTCTACGCCT CTGTGGACCG GCCGCTAACG
CAGGCCCTGC GCGGCGCTAC GGTCGATAAC CGGGATGTGC TGTTTCGCAA ACCCGGCTTT
GAAGACCGTG TCCTGAGGGT CAGCGCCAGG CCGCTGCGGG ACCACGACAA TCAACTGGTG
GGCGCTGTGG CGGTGTTCAA TGACGTCACC GACCTGAAGG CTGCGGAAAG TTTTTTCCGT
GGCCAGCGGG AGGTGCTGGC GCTGATAGCC AGCGGCGCCC CCCTGTCGCA GTCGCTCGAA
GCCATTGTGC GGCTCATCGA AGGCCGGGTG GCCGGCGGTC TGTGCTCCAT CCTGCTGGTG
GAGGGCCAGC AGTTGCACCA TGGGGCTGCG GCCGGCCTGC CGGAGAGCTT TATGCGGCTG
ATCGACGGGC TTCCGGTTGG CCAGGGCGCC GGCGCCTGTG GCACCGCTGC TTTCCTGAAG
CAAGCGGTGA TTGTTGAAGA CATCGCGACC GATCCCCTGA TGAAGGACTT CCGCGAGGTG
GCCAGGACCT ACGGCCTGCA GGCCTGCTGG TCAACGCCGG TGATCTCGGG GGAGGGCGAG
GTGCTGGCCA CGTTTGCCGT GTACCACCGG ACGCCCTGCA AGCCGCGGGA CAAGGACCTG
GAGCTGCTGG AAACCGGCAT CCGGCTGGCG CGCATCGCCC TGGAACACAC CCGTGCGCAG
GCTGCGCTGG TGAGCAGCGA AGCGCGTTTT CGTGAACTGG CGGACAACAT CCAGGATGTG
TTTTACAACC GCGACGCCCG CACCGGCCGC ATGTTGTATG TCAGCCCGGG TTATGAGCGG
ATCTGGGGGC TTAGCTGCGA GAGCCTCTAC GCCGATCCCA AGTCCTATCG CGGTGCGGTT
CTGCCCGAAG ACCGGCCCGT GCTGGAGATG GCTGATGAGC TCACAGCGGC CGGAAAGGTT
TGTGATCTCG AGTACCGCAT CATCTCCCCG GATGGCCAGA CGCGCTGGAT ACGCGATAAC
GCTTACCCGG TGTTCAATGC CGCAGGTGAG CTCGAGCGCG TGGTGGGCAC GGCACGCGAC
ATCACCGACC GCAAGCTCGC CGACCGGGCG CTGGACAGCA CCAACCGTGC GATGCAGATG
CTCAGCCGCT CCAGTGTGGC GCTGAACCGG ATCGACGACG AGGCCAGCCT GCTGGCCGAG
GTTTGCCGCG TGGCCGTCGA GGTGGGCAGC TACCGCATGG CCTGGGTGGG GTATGCCCGG
GACGATGAGG CGCGCAGCAT TGAGCCGATG GCTCATGCCG GCGAAGAGGC CGGCTACCTG
GCGATGGTCA ATGTCAGCTG GCAGGAGGAC GATGCGACGG GTCAGGGTCC GGCTGGCCAG
GCCATTCGCA GCGGGCAGCC ACAGCAGACC GGGGACATCG CCGCTGCCAG CAACCATTTT
TTCTGGCAGG AGGCGGCCCT GCAGCGCGGC TACCGAAGTG CCATCTGCTT GCCCTTGCGC
GACGACGGGC GGCGCGGTTT TGGTGTGCTG TGCCTGTATG CCGCAGAGGT GCAGCATTTT
GTCGCCGGGG AAGTCAGTCT CTTGCAGGAG CTCGCCGACA ACCTGGCCTT TGGCATTGTC
AGCCTGCGCG CCCGGCTGGA GCGTCGCCGC AGCGAGGAGT TGGTGCGCCA GACTGCCGCC
AAGATGCGCG AACAGGCTTC GCTGCTTGAC CGGGCGCAGG ACGCCATCAT GGTGCGCAAC
CTTGACAGAA CCCTGCGTTA CTGGAACAAG GGCGCGGAGC GGCTGTACGG CTGGACCGCC
GAAGAGGTGC TGGGCAAGAC CATGGACGAG TTCATGTACC GCAGCCCGCA AGTGCTCATC
AGCGCGATGA ACCGGACTCT GGCCAACCAT GGCGAGTGGA CCGGCGAGCT GGAGCAGGTG
GCGCGCGATG GCTCCACCGT GTATATCGAG GCGCGCTGGA CTGTGGTGCG CGATGAGCAC
GGCCAGGTCA ACGGCGTGCT GGGCATCAAC ACCGACATCC GCGAGCGCAA GCGGGCGCAT
GAAGAAATCC TGCGTCTCAA TACCAGCCTC GAAGAGCGCG TGCAGCAGCG CACCGCGCAG
CTGGAGTTTG CCAACAAGCA GCTGGAATCC TTTTCCTATT CGGTCTCGCA TGACCTGCGC
ACCCCGCTCA GTGCCATTGA CGGGTTCAGC GATCTGCTCG ACAAGGCGCT GGCCAAAACA
GTCAGTGGTC CGCAGGCGGA TCGCAGCCGG CACTACCTGT CGCGCATTCG TGCCGGTGTT
TCACAAATGG GCGAACTGAT AGACGCCATG CTGTCACTGG CCCAGGTCTC GCGCGCGAGC
CTGCGATGGG AGACGGTGGA CCTCAGCGCC CTCGCTCTGG ACGTGCTGGC CCGCCAACGG
GACAGGGAGC CCGGCAGGGT GGCGCAGCTG CAAGTCGATC CGGGCCTGGC GGCTCAGGGC
GATCCGCGGC TGCTCCAGCA GGTGCTCGAG AATCTGCTGG GCAATGCCTG GAAATTCAGC
GCCGGGACGG CCCGTACCGA GATCACCTTC GGCCAGCAGG CGGGCCCTGG CAGCGAAACG
GTTTACTTCG TACGCGACAA CGGCGCGGGT TTTGACATGG CGTATTCCGA AAAACTGTTC
GGTGCCTTCC AGCGGCTGCA TTCGCCGTCC GAATTTTCGG GAACCGGCAT CGGCCTGACC
ACGGTGCAGC GAATTATTGC GCGCCATGGC GGCAGGGTCT GGGGCGAGGC CGCCCTTGGC
CGCGGCGCCA CGTTTTACTT CACGCTGGGC GCTGCGCGAC TTTGA
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| Protein sequence | MLSWGGLRFR LVWLALIALV PVFGLFACTA AKNQQTALEL ARSRLQSDVL LAAAHQQRLV
DRVAQLLGDI ASGPSVKDTR NRLCVQYLKN LQSQDAAYAN LGVVGLDGKV SCHAMDSGFD
VYAGDRPFFQ QVLAGRKFSV GEYSTGRASG RPGISFAVPV YSSEGMLNGV AFAALDVGKM
AQALAAGPVL DGAQLRLMDR RGTIVAMHPA GAGLQGTPER DAVVLEAAQA QRSGIREAVD
ANGVGRVYAY APVGGTGGDG LFLAISAPRD VITAGPQKTL LINLLALLGM TAFGMGCAWW
LGGRSIVKPA AAILTTANEI AGGNLAARVR LGPLHRGEFG EIGSSFNRMA ESLQARQDEV
GAALGRVDKE RALLDLIINS MSEGVVAVDT GGRFLLFNDT VGKLFSAAEL GSPLDEWRRD
HELLALDGET VYASVDRPLT QALRGATVDN RDVLFRKPGF EDRVLRVSAR PLRDHDNQLV
GAVAVFNDVT DLKAAESFFR GQREVLALIA SGAPLSQSLE AIVRLIEGRV AGGLCSILLV
EGQQLHHGAA AGLPESFMRL IDGLPVGQGA GACGTAAFLK QAVIVEDIAT DPLMKDFREV
ARTYGLQACW STPVISGEGE VLATFAVYHR TPCKPRDKDL ELLETGIRLA RIALEHTRAQ
AALVSSEARF RELADNIQDV FYNRDARTGR MLYVSPGYER IWGLSCESLY ADPKSYRGAV
LPEDRPVLEM ADELTAAGKV CDLEYRIISP DGQTRWIRDN AYPVFNAAGE LERVVGTARD
ITDRKLADRA LDSTNRAMQM LSRSSVALNR IDDEASLLAE VCRVAVEVGS YRMAWVGYAR
DDEARSIEPM AHAGEEAGYL AMVNVSWQED DATGQGPAGQ AIRSGQPQQT GDIAAASNHF
FWQEAALQRG YRSAICLPLR DDGRRGFGVL CLYAAEVQHF VAGEVSLLQE LADNLAFGIV
SLRARLERRR SEELVRQTAA KMREQASLLD RAQDAIMVRN LDRTLRYWNK GAERLYGWTA
EEVLGKTMDE FMYRSPQVLI SAMNRTLANH GEWTGELEQV ARDGSTVYIE ARWTVVRDEH
GQVNGVLGIN TDIRERKRAH EEILRLNTSL EERVQQRTAQ LEFANKQLES FSYSVSHDLR
TPLSAIDGFS DLLDKALAKT VSGPQADRSR HYLSRIRAGV SQMGELIDAM LSLAQVSRAS
LRWETVDLSA LALDVLARQR DREPGRVAQL QVDPGLAAQG DPRLLQQVLE NLLGNAWKFS
AGTARTEITF GQQAGPGSET VYFVRDNGAG FDMAYSEKLF GAFQRLHSPS EFSGTGIGLT
TVQRIIARHG GRVWGEAALG RGATFYFTLG AARL
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