| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0142 |
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| Symbol | |
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| ID | 4012110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 149588 |
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| End bp | 150547 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637939826 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_547005 |
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| Protein GI | 91786053 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.3464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAG TTCCCGGCAA CCCCTCGATG GCACAGCGCA TTGCACGCGT GTTGCCGACG
CTGACACGCT CGCACCGGCA GATGGCCGAC TATGTGCTCG CCCACCCCTT GCAGGCCGCC
ACCATGCCCA TCGACGAGCT GGCCGCCACG CTGGGGGTTT CGGTGGCCAC CGCCAACCGG
TTTGCGCGGG CGCTCGAATT TGACGGCTAC CAGCAGTTCC GCGCGGCGCT GGTGCTGGGC
TTTGAAACCA CGCTGGCCCC GGTCGAGAAG CTGCGCAGCA CGCTCGAACA CCCCACCACG
GTGGCGGACG TGTTCGCGAG CGCTCTGGCG GAAAACCAGC GCAACATCGA TTTGACGCGG
CAATCGCTCG ATGCCCACAG CTGCGAGCAG GCGGTGGGCG CCATCCTGAA CGCAAAACGC
ATTTACATCA TGGGCTTTGG CGCCAGCAGC TGGCTGGGCG GGCTGTTGCA GCGCAGCCTG
GACCCGTACT GCGACAACGT GCAGTTGCTG GCCAATATTG AGAGTTCCTC CCACGCCGCG
CGCGTCCTGA CACGCCTGCA GCCCACAGAC CTGCTCATCG CCATTGCCTA CCCCCGGTAT
TTCGCCGACA CCGTGTTGCT GACGCGCCGC GCGCGCGAAG CCGGCGTGCC GGTCCTGGCG
CTCACGGATC GTGTGACGTC GCCACTGGCG CCGCTGGCCA CGGTGGCGCT TTATGCCCAT
ACCGACAGCC AGTACTTTGC CAACTCCGAG GCCAGCGCAC TGGCACTCAT CGAAGCGTTA
AGCAGCGCTG TCGCCCACAG CGCCAAGGGC TCGCTCAAGG CGGCGACGCA GCTGGCCGAG
TCGGTGCTGC CCTGGCTGCA CGGCAGCCAC AGCGGCCGGC TGCGCGCCGT GGCCGAGGCC
GCGGCGCCTG CGCCCCGCAA GGCCAACGCC AAATCGAAAT CCTCAAAGGC CCCCAAGTGA
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| Protein sequence | MTTVPGNPSM AQRIARVLPT LTRSHRQMAD YVLAHPLQAA TMPIDELAAT LGVSVATANR
FARALEFDGY QQFRAALVLG FETTLAPVEK LRSTLEHPTT VADVFASALA ENQRNIDLTR
QSLDAHSCEQ AVGAILNAKR IYIMGFGASS WLGGLLQRSL DPYCDNVQLL ANIESSSHAA
RVLTRLQPTD LLIAIAYPRY FADTVLLTRR AREAGVPVLA LTDRVTSPLA PLATVALYAH
TDSQYFANSE ASALALIEAL SSAVAHSAKG SLKAATQLAE SVLPWLHGSH SGRLRAVAEA
AAPAPRKANA KSKSSKAPK
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